Structure of PDB 8c84 Chain A Binding Site BS01
Receptor Information
>8c84 Chain A (length=90) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHS
NKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKK
Ligand information
>8c84 Chain K (length=14) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aactatttataaga
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8c84
Structural basis of myocyte enhancer factor-2 recruitment of class II histone deacetylases.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
G2 R3 K5 K31
Binding residue
(residue number reindexed from 1)
G1 R2 K4 K30
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000977
RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677
DNA binding
GO:0046983
protein dimerization activity
Biological Process
GO:0045944
positive regulation of transcription by RNA polymerase II
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8c84
,
PDBe:8c84
,
PDBj:8c84
PDBsum
8c84
PubMed
38492719
UniProt
Q14814
|MEF2D_HUMAN Myocyte-specific enhancer factor 2D (Gene Name=MEF2D)
[
Back to BioLiP
]