Structure of PDB 8c6z Chain A Binding Site BS01

Receptor Information
>8c6z Chain A (length=573) Species: 1502 (Clostridium perfringens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KLRNVMYYGDWSIWGGQGNFYPKDIPADKLTHLNFAFMDFNSSGELIYCD
KDAAIGHPLGNLGVTYGDVNGGILNAFQVLKSENPNLKIGVSLGGWSKSG
DFSTIAATPSIRAKFVENVMKFIKYTNMDFVDIDWEYPGDYREPDKTDNI
NDEGTPNASAGDKENYILLLQDLKEALNKQGKELGKVYELSVALPAGVSK
IEKGIDVDKLFNIVDFANIMTYDMAGAWSTTSGHQTALYTNPNAPEEYKG
LSVDESVKYYISQGAEREKIVVGAAYYTRGWEQVSDKGTDPNNPGLFGEA
AVVNKDADLSPTPGALNEAPMKNGEGGRAGGVWGYNALDKLKSKYTGLKE
YWDDSAKAPYLYNSETGAFFTYDNIRSIQEKAKYVKENNLGGIIGWMASQ
DATTNSTKRDELTTATKESLFGKEDLPKYEIKYTENDITCTVTPVKQSWG
SGGVLKMSITNNEKLDESGEVLSTVETSAKTVKNMKVYIKTDGIAITGSQ
YPAGPVTKEGDYYVIDFGKISDGKLMKAGITFTFDLNLDKAIEDTNNIIS
IEVSQRMYQTSPEFNRQTIWENT
Ligand information
Ligand IDCO
InChIInChI=1S/Co/q+2
InChIKeyXLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Co+2]
CACTVS 3.341[Co++]
FormulaCo
NameCOBALT (II) ION
ChEMBL
DrugBankDB14205
ZINC
PDB chain8c6z Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8c6z Contribution and structural characterization of Chitinases to Clostridium perfringens Pathogenesis in Broilers
Resolution1.85 Å
Binding residue
(original residue number in PDB)
D232 G288 E290
Binding residue
(residue number reindexed from 1)
D208 G264 E266
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008061 chitin binding
GO:0016787 hydrolase activity
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8c6z, PDBe:8c6z, PDBj:8c6z
PDBsum8c6z
PubMed
UniProtF8UNI4

[Back to BioLiP]