Structure of PDB 8bvk Chain A Binding Site BS01

Receptor Information

>8bvk Chain A (length=225) Species: 358 (Agrobacterium tumefaciens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

KLDDSKTLPIAAQMYTLRNAGTLEEQLAILNRAGVSAVETVDMQKVSASE
LNALLEKHKIKVISSHVPIDKLRGNLDEVITEQKAVGNPVVTVPFLKPED
RPKDAAGWTAFGKELGGYADKLSAAGLSMAYHNHDFEMVKFDGKTALELL
LDAAGPKLQSELDVAWVARSGNDPAEFLGTLNGRVFAIHAKDDAPAGTAL
DWKTILPAAKHAGAQWFILEHDLPL

Ligand information

Ligand ID

InChI

InChI=1S/Mn/q+2

InChIKey

WAEMQWOKJMHJLA-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mn+2]
CACTVS 3.341	[Mn++]

Formula

Name

MANGANESE (II) ION

PDB chain

8bvk Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	8bvk Enzymatic beta-elimination in natural product deglycosylation: C-C bond cleavage as a specialty of a conserved mechanism
Resolution	2.0 Å
Binding residue (original residue number in PDB)	E39 H66 H132 E161
Binding residue (residue number reindexed from 1)	E39 H66 H132 E161
Annotation score	4

External links

PDB	RCSB:8bvk, PDBe:8bvk, PDBj:8bvk
PDBsum	8bvk
PubMed	37932298

[Back to BioLiP]