Structure of PDB 8bnv Chain A Binding Site BS01

Receptor Information

>8bnv Chain A (length=381) Species: 197162 (Deferribacter desulfuricans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SKNLFITGKAGTGKSTFLKYLINELLFDAVVLAPTGVAAINIGGETIHSF
FNFPINITPDKIPDLFIYDYEIYKYVNTIIIDEISMVRADLLDCIDLFLK
RVKNPKLPFGGTKMIFIGDLYQLPPMEYESPYFFSAKVFKEMDMEFIEFE
TIYRQSDKLFIDILNRIRNNTVTDEDIKIINSRVQDKIDNDDGYIYITTV
NKKAEEINNQKLDKLKGKLYKLNGTLKGNFDENSLPTPKNLHLKIGAQVM
LLNNAPDRMWVNGTIGTITNIFPDEMIIELALENGNIVEITPFKWDMIKF
TYDKKEKKMLSETIGSYTQFPLKLAYAITVHKSQGKTFHKVIIDTSRHFF
APGQFYVALSRCTSLDGIILTKKITKNSIIL

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

8bnv Chain A Residue 602 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8bnv Structural Studies of Pif1 Helicases from Thermophilic Bacteria.
Resolution	2.86 Å
Binding residue (original residue number in PDB)	D47 T97
Binding residue (residue number reindexed from 1)	D28 T78
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003678	DNA helicase activity
GO:0046872	metal ion binding

	Biological Process
GO:0000723	telomere maintenance
GO:0006281	DNA repair
GO:0032508	DNA duplex unwinding

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Molecular Function

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Biological Process

External links

PDB	RCSB:8bnv, PDBe:8bnv, PDBj:8bnv
PDBsum	8bnv
PubMed	36838444
UniProt	D3PAZ1

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