Structure of PDB 8a7r Chain A Binding Site BS01

Receptor Information
>8a7r Chain A (length=336) Species: 80249 (Phaedon cochleariae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SKEESREFMAIFPDIVRDLTDAGRHTDIPEVTKRFAKVLQYNVPTGKKTR
GLSTVIAYKMLEKPENLTPENVRLAGILGWCVELLQASLLIMDDLMDRSE
TRRGQPCWYRQENVGFLAINDCLHVESSLYSVLRKYFSHLPCYVPIIELF
HDVNFKTNMGQSLDALCMKDGRPILSQFTMKRYSSIVKYKTSYYTFQLPV
SLGMYLADMYDPEQHRQAKTILMEIGEFFQIQDDFLDAFGDSVGTDIKEG
KCSWLAVVALQRSNPAQRQIMEEHYGRPEPESTQIIKNLYIELGLPATFA
VYEEESFNIIRTHIHQISKGLPHDLFFKAMKKIYKR
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8a7r Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8a7r Metal-dependent enzyme symmetry guides the biosynthetic flux of terpene precursors.
Resolution2.0 Å
Binding residue
(original residue number in PDB)
D179 D183
Binding residue
(residue number reindexed from 1)
D93 D97
Annotation score1
Enzymatic activity
Enzyme Commision number 2.5.1.1: dimethylallyltranstransferase.
Gene Ontology
Molecular Function
GO:0004659 prenyltransferase activity
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
Biological Process
GO:0008299 isoprenoid biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8a7r, PDBe:8a7r, PDBj:8a7r
PDBsum8a7r
PubMed37308711
UniProtM1JS91

[Back to BioLiP]