Structure of PDB 7zdd Chain A Binding Site BS01
Receptor Information
>7zdd Chain A (length=176) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRD
IGKPEVEYDCDGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYK
IIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFNEADSEV
AQAGKAVALYFEDKLTEIYSDRTFAP
Ligand information
>7zdd Chain D (length=10) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ARTKQTARKK
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7zdd
Identification of Histone Peptide Binding Specificity and Small-Molecule Ligands for the TRIM33 alpha and TRIM33 beta Bromodomains.
Resolution
1.625 Å
Binding residue
(original residue number in PDB)
D884 N886 E887 D888 W889 G896 G897 L899 L900 C901 P922 S923 G924
Binding residue
(residue number reindexed from 1)
D1 N3 E4 D5 W6 G13 G14 L16 L17 C18 P39 S40 G41
Enzymatic activity
Enzyme Commision number
2.3.2.27
: RING-type E3 ubiquitin transferase.
External links
PDB
RCSB:7zdd
,
PDBe:7zdd
,
PDBj:7zdd
PDBsum
7zdd
PubMed
36098557
UniProt
Q9UPN9
|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 (Gene Name=TRIM33)
[
Back to BioLiP
]