Structure of PDB 7yya Chain A Binding Site BS01
Receptor Information
>7yya Chain A (length=157) Species:
36809
(Mycobacteroides abscessus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MTGAVCPGSFDPVTLGHLDVFERAAAQFDEVIVAVLINPNKAGMFTVDER
IEMIRESTADLPNLRVESGQGLLVDFVRERGLNAIVKGLRTGTDFEYELQ
MAQMNKHIAGVDTFFVATAPAYSFVSSSLAKEVATYGGDVSALLPASVHQ
RLLGKLR
Ligand information
Ligand ID
EQ5
InChI
InChI=1S/C11H11NO2/c13-11(14)6-8-12-7-5-9-3-1-2-4-10(9)12/h1-5,7H,6,8H2,(H,13,14)
InChIKey
OSWNOVFZARRSKM-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
OC(=O)CCn1ccc2ccccc12
OpenEye OEToolkits 2.0.6
c1ccc2c(c1)ccn2CCC(=O)O
Formula
C11 H11 N O2
Name
3-indol-1-ylpropanoic acid
ChEMBL
CHEMBL3422320
DrugBank
ZINC
ZINC000000179924
PDB chain
7yya Chain A Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7yya
Structural Characterization of Mycobacterium abscessus Phosphopantetheine Adenylyl Transferase Ligand Interactions: Implications for Fragment-Based Drug Design.
Resolution
1.807 Å
Binding residue
(original residue number in PDB)
P7 H17 V20 K87 G88 R90 T118
Binding residue
(residue number reindexed from 1)
P7 H17 V20 K87 G88 R90 T118
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.7.7.3
: pantetheine-phosphate adenylyltransferase.
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0004595
pantetheine-phosphate adenylyltransferase activity
GO:0005524
ATP binding
GO:0016779
nucleotidyltransferase activity
Biological Process
GO:0009058
biosynthetic process
GO:0015937
coenzyme A biosynthetic process
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7yya
,
PDBe:7yya
,
PDBj:7yya
PDBsum
7yya
PubMed
35712348
UniProt
B1MDL6
|COAD_MYCA9 Phosphopantetheine adenylyltransferase (Gene Name=coaD)
[
Back to BioLiP
]