Structure of PDB 7ym5 Chain A Binding Site BS01

Receptor Information
>7ym5 Chain A (length=304) Species: 28901 (Salmonella enterica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FTSFNGKDYPLCFLDEKTPLLFQWFERNPARFGKNDIPIINTEKNPYLNN
IIKAATIEKERLIGIFVDGDFFPGQKDAFSKLEYDYENIKVIYRNDIDFS
MYDKKLSEIYMENISKQESMPEEKRDCHLLQLLKKELSDIQEGNDSLIKS
YLLGHGWFDFYRNMAMLKAGQLFLEADKVGCYDLSTNSGCIYLDADMIIT
EKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNNHPALLAGLEIMHTK
FDADPYSDGVCNGIRKHFNYSLNEDYNSFCDFIEFKHDNIIMNTSQFTQS
SWAR
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain7ym5 Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7ym5 Crystal structure of the Salmonella effector SseK1
Resolution3.45 Å
Binding residue
(original residue number in PDB)		D225 N322 S324
Binding residue
(residue number reindexed from 1)		D196 N293 S295
Annotation score1
Enzymatic activity
Enzyme Commision number 2.4.1.-
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0046872 metal ion binding
GO:0090729 toxin activity
GO:0106362 protein-arginine N-acetylglucosaminyltransferase activity
Biological Process
GO:0035821 modulation of process of another organism
Cellular Component
GO:0005576 extracellular region
GO:0030430 host cell cytoplasm
GO:0044164 host cell cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7ym5, PDBe:7ym5, PDBj:7ym5
PDBsum7ym5
PubMed36369343
UniProtQ9L9J3|SSEK1_SALTY Protein-arginine N-acetylglucosaminyltransferase SseK1 (Gene Name=sseK1)

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