Structure of PDB 7yj9 Chain A Binding Site BS01

Receptor Information
>7yj9 Chain A (length=389) Species: 2066561 (Odontosoria chusana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RKMERAEGPASVLAIGTAVPPNVVYQKDYPDFYFGVTNSNHKTELKDKFQ
RMCDKSCVSKRHLYLTEEILKANPSLCAYWEPSLDLRQDIVVVEVPKLGK
QAASAAIKEWGQPKSKITHLIFCTTSGVDMPGADWALAKLLGLRSSVKRL
VLYMQGCYGGGTVLRIAKDLAENNKGARVLVVCSEITAITFRGPSDTHLD
SLVGQALFGDGASALIVGSDPVPAVERAWFELHWTGSDILPNSDGAIDGH
LKEVGLTFHLMKDVPAIISKNIGGILKDALAKVFPAAAPPPPTYNDLFWI
THPGGPAILDQVEDRLGLRKDKLASTRAVLDQFGNMSSATVLFIMDEMRK
RSVEQQLGTTGEGHEWGLLLGFGPGLTCETVVLRSVPLV
Ligand information
Ligand IDNAR
InChIInChI=1S/C15H12O5/c16-9-3-1-8(2-4-9)13-7-12(19)15-11(18)5-10(17)6-14(15)20-13/h1-6,13,16-18H,7H2/t13-/m0/s1
InChIKeyFTVWIRXFELQLPI-ZDUSSCGKSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0c1cc(ccc1C2CC(=O)c3c(cc(cc3O2)O)O)O
CACTVS 3.341Oc1ccc(cc1)[CH]2CC(=O)c3c(O)cc(O)cc3O2
OpenEye OEToolkits 1.5.0c1cc(ccc1[C@@H]2CC(=O)c3c(cc(cc3O2)O)O)O
ACDLabs 10.04O=C2c3c(OC(c1ccc(O)cc1)C2)cc(O)cc3O
CACTVS 3.341Oc1ccc(cc1)[C@@H]2CC(=O)c3c(O)cc(O)cc3O2
FormulaC15 H12 O5
NameNARINGENIN
ChEMBLCHEMBL9352
DrugBankDB03467
ZINCZINC000000156701
PDB chain7yj9 Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7yj9 Molecular and structural characterization of a promiscuous chalcone synthase from the fern species Stenoloma chusanum.
Resolution1.851 Å
Binding residue
(original residue number in PDB)		S137 C168 E196 I197 T198 T201 F219 G220 D221 I258 L267 F269 P397
Binding residue
(residue number reindexed from 1)		S126 C157 E185 I186 T187 T190 F208 G209 D210 I247 L256 F258 P374
Annotation score1
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 04:47:37 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7yj9', asym_id = 'A', bs = 'BS01', title = 'Molecular and structural characterization of a p...ynthase from the fern species Stenoloma chusanum.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7yj9', asym_id='A', bs='BS01', title='Molecular and structural characterization of a p...ynthase from the fern species Stenoloma chusanum.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0009058,0016746,0016747', uniprot = '', pdbid = '7yj9', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0009058,0016746,0016747', uniprot='', pdbid='7yj9', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>