Structure of PDB 7y8t Chain A Binding Site BS01

Receptor Information
>7y8t Chain A (length=1298) Species: 237368 (Candidatus Scalindua brodae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DMNITVELTFFEPYRLVEWFDWDARKKSHSAMRGQAFAQWTWKGKGRTAG
KSFITGTLVRSAVIKAVEELLSLNNGKWEGVPCCNGSFQTDESKGKKPSF
LRKRHTLQWQANNKNICDKEEACPFCILLGRFDNAGKVHERNKDYDIHFS
NFDLDHKQEKNDLRLVDIASGRILNRVDFDTGKAKDYFRTWEADYETYGT
YTGRITLRNEHAKKLLLASLGFVDKLCGALCRIEVISEDHNDELRKQAEV
IVEAFKQNDKLEKIRILADAIRTLRLHGEGVIEKDELPDGKEERDKGHHL
WDIKVQGTALRTKLKELWQSNKDIGWRKFTEMLGSNLYLIYKKETGTRFR
ILGDTEYYSKAHDSEGSDLFIPVTPPEGIETKEWIIVGRLKAATPFYFGV
QQPSDSIPGKESLVINEHTSFNILLDKENRYRIPRSALRGALRRDLRTAF
GSGCNVSLGGQILCNCKVCIEMRRITLKDSVSDFSEPPEIRYRIAKNPGT
ATVEDGSLFDIEVGPEGLTFPFVLRYRGHKFPEQLSSVIRYWEENDGKNG
MAWLGGLDSTGKGRFALKDIKIFEWDLNQKINEYIKERGMRGKEKELLEM
GESSLPDGLIPYKFFEERECLFPYKENLKPQWSEVQYTIEVGSPLLTADT
ISALTEPGNRDAIAYKKRVYNDGNNAIEPEPRFAVKSETHRGIFRTAVGR
RTGDLGKEDHEDCTCDMCIIFGNEHESSKIRFEDLELINGNEFEKLEKHI
DHVAIDRFTGGALDKAKFDTYPLAGSPKKPLKLKGRFWIKKGFSGDHKLL
ITTALSDIRDGLYPLGSKGGVGYGWVAGISIDDNVPDDFKEMINKTEMPL
PEEVEESNNGPINNDYVHPGHQSPKQDHKNKNIYYPHYFLDSGSKVYREK
DIITHEEFTEELLSGKINCKLETLTPLIIPDTSDENGLKLQGNKPGHKNY
KFFNINGELMIPGSELRGMLRTHFEALTKSCFAIFGEDSTLSWRCASKTL
GGKLDKALHPCTGLSDGLCPGCHLFGTTDYKGRVKFGFAKYENGPEWLIT
RGNNPERSLTLGVLESPRPAFSIPDDESEIPGRKFYLHHNGWRIIRQKQL
EIRETVQPERNVTTEVMDKGNVFSFDVRFENLREWELGLLLQSLDPGKNI
AHKLGKGKPYGFGSVKIKIDSLHTFKINSNNDKIKRVPQSDIREYINKGY
QKLIEWSGNNSIQKGNVLPQWHVIPHIDKLYKLLWVPFLNDSKLEPDVRY
PVLNEESKGYIEGSDYTYKKLGDKDNLPYKTRVKGLTTPWSPWNPFQV
Ligand information
>7y8t Chain D (length=37) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggacuuaaugucacgguacccaauuuucugccccgga
.....................................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7y8t Structure of Cas7-11-crRNA in complex with TPR-CHAT
Resolution2.9 Å
Binding residue
(original residue number in PDB)
W23 R37 T45 K55 F57 T61 L62 R64 S91 Q93 T94 F104 L105 R106 K107 G134 K141 H143 H152 F153 N155 I177 L178 N179 K187 A188 D190 F192 K229 R380 Y389 S391 S473 R476 R481 L495 L514 Y529 R530 I531 K533 V540 L545 F546 G593 L594 R728 N760 E761 S765 H789 V790 A791 I792 G798 A799 K804 F805 S854 T969 S1001 E1002 G1005 R1008 R1031 T1422 L1459 E1460 S1461 P1462 R1463 A1465 Y1481 G1550 K1551 G1552 K1553 Y1645 L1648 Y1663
Binding residue
(residue number reindexed from 1)
W19 R33 T41 K51 F53 T57 L58 R60 S87 Q89 T90 F100 L101 R102 K103 G130 K137 H139 H148 F149 N151 I173 L174 N175 K183 A184 D186 F188 K225 R348 Y357 S359 S436 R439 R444 L458 L477 Y492 R493 I494 K496 V503 L508 F509 G556 L557 R691 N723 E724 S728 H752 V753 A754 I755 G761 A762 K767 F768 S817 T932 S964 E965 G968 R971 R994 T1027 L1064 E1065 S1066 P1067 R1068 A1070 Y1086 G1155 K1156 G1157 K1158 Y1250 L1253 Y1268
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051607 defense response to virus

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7y8t, PDBe:7y8t, PDBj:7y8t
PDBsum7y8t
PubMed36280712
UniProtA0A0B0EGF3

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