Structure of PDB 7y84 Chain A Binding Site BS01 |
| >7y84 Chain A (length=1242) Species: 237368 (Candidatus Scalindua brodae)
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MNITVELTFFEPYRLVEWFDWDARKKSHSAMRGQAFAQWTWKGKGRTAGK
SFITGTLVRSAVIKAVEELLSLNNGKWEGVPCCNGSFQTDESKGKKPSFL
RKRHTLQWQANNKNICDKEEACPFCILLGRFDNAGKVHERNKDYDIHFSN
FDLDHDLRLVDIASGRILNRVDFDTGKAKDYFRTWEADYETYGTYTGRIT
LRNEHAKKLLLASLGFVDKLCGALCRIEVIDHNDELRKQAEVIVEAFKQN
DKLEKIRILADAIRTLRLHGEGVIEKDELPDGKEERDKGHHLWDIKVQGT
ALRTKLKELWQSNKDIGWRKFTEMLGSNLYLIYKKETGRFRILGDTEYYS
SDLFIPVTPPEGIETKEWIIVGRLKAATPFYFGVQQPSDSIPGKEKLVIN
EHTSFNILLDKENRYRIPRSALRGALRRDLRTAFGSGCNVSLGGQILCNC
KVCIEMRRITLKDSVSDFSEPPEIRYRIAKNPGTATVEDGSLFDIEVGPE
GLTFPFVLRYRGHKFPEQLSSVIRYWEENDGKNGMAWLGGLDSTGKGRFA
LKDIKIFEWDLNQKINEYIKERGMRGKEKELLEMGESSLPDGLIPYKFFE
ERECLFPYKENLKPQWSEVQYTIEVGSPLLTADTISALTEPGNRDAIAYK
KRVYNDGNNAIEPEPRFAVKSETHRGIFRTAVGRRTGDLGKEDHEDCTCD
MCIIFGNEHESSKIRFEDLELINGNEFEKLEKHIDHVAIDRFTGGALDKA
KFDTYPLAGSPKKPLKLKGRFWIKKGFSGDHKLLITTALSDIRDGLYPLG
SKGGVGYGWVAGISIDDNVPDDFKEMIINNDYVHPGHQSPKQDHKNKNIY
YPHYFLDSGSKVYREKDIITHEEFTEELLSGKINCKLETLTPLIIPDTSD
ENGLKLQGNKPGHKNYKFFNINGELMIPGSELRGMLRTHFEALTKSCFAI
FGEDSTLSASKTLGGKLDKALHPCTGLSDGLCPGCHLFGTTDYKGRVKFG
FAKYENGPEWLITRGNNPERSLTLGVLESPRPAFSIPDDESEIPGRKFYL
HHNGWRIIRQKQLEIRETVQPERNVTTEVMDKGNVFSFDVRFENLREWEL
GLLLQSLDPGKNIAHKLGKGKPYGFGSVKIKIDSLHTFKIKRVPQSDIRE
YINKGYQKLIEWSGLPQWHVIPHIDKLYKLLWVPFLSKLEPDVRYPVLNE
ESKGYIEGSDYTYKKLGDKDNLPYKTRVKGLTTPWSPWNPFQ |
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| PDB | 7y84 Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase |
| Resolution | 2.61 Å |
Binding residue
(original residue number in PDB) | E16 R19 W23 R37 Q39 A40 F41 T45 K47 K55 F57 G60 T61 L62 R64 S65 S91 F92 Q93 T94 K101 P102 S103 F104 L105 R106 K107 R108 L133 G134 R135 G140 K141 H143 Y149 H152 F153 S154 N155 D157 R176 I177 L178 N179 R180 V181 G186 K187 A188 D190 Y191 F192 R208 K229 G232 E322 D386 Y389 S391 D400 G431 R472 S473 A474 R476 G477 R481 V493 S494 L495 G497 L500 R510 T513 L514 R530 I531 A532 K533 T539 V540 L545 F546 G592 G593 L594 A685 T687 K723 E725 T726 R728 G729 I730 R732 T733 N760 E761 S764 S765 D788 H789 V790 A791 I792 R794 G797 G798 A799 K804 F805 G853 S854 Y922 P967 T969 S1001 E1002 R1004 G1005 T1009 I1021 G1421 T1422 T1423 Y1425 K1426 V1458 L1459 E1460 S1461 R1463 F1466 K1479 Y1481 G1550 K1551 G1552 K1553 P1554 Y1645 L1648 Y1663 |
Binding residue
(residue number reindexed from 1) | E11 R14 W18 R32 Q34 A35 F36 T40 K42 K50 F52 G55 T56 L57 R59 S60 S86 F87 Q88 T89 K96 P97 S98 F99 L100 R101 K102 R103 L128 G129 R130 G135 K136 H138 Y144 H147 F148 S149 N150 D152 R166 I167 L168 N169 R170 V171 G176 K177 A178 D180 Y181 F182 R198 K219 G222 E285 D345 Y348 S350 D352 G383 R419 S420 A421 R423 G424 R428 V440 S441 L442 G444 L447 R457 T460 L461 R477 I478 A479 K480 T486 V487 L492 F493 G539 G540 L541 A632 T634 K670 E672 T673 R675 G676 I677 R679 T680 N707 E708 S711 S712 D735 H736 V737 A738 I739 R741 G744 G745 A746 K751 F752 G800 S801 Y851 P896 T898 S930 E931 R933 G934 T938 I950 G989 T990 T991 Y993 K994 V1026 L1027 E1028 S1029 R1031 F1034 K1047 Y1049 G1118 K1119 G1120 K1121 P1122 Y1195 L1198 Y1213 |
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