Structure of PDB 7y1s Chain A Binding Site BS01

Receptor Information
>7y1s Chain A (length=494) Species: 1390 (Bacillus amyloliquefaciens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SHMASMFYASDQLRHPETLVIGLFQKSTLSGFTKELDDKLDGHLTQLLKD
GDVSAKRNRVSKVYPPAATGMKRIYFIGMGREADYSFEDTKECFARVFQQ
IHQDKKQEVSVLLDTFVSGEVPAADAAHALSESCLLAVYEVQDYKHQELT
SVCAVTEEDLREVQAGLNVGAAYGQGTNSARTLVNMPGNMLTATDLASYA
AELAAKYDFECEILEKDEMEELGMGGLLAVNKGSSEPPKMIVLKYQGKDQ
WEDVIGLVGKGITFDTGGYSIKPKTGIVGMKSDMGGAASVLGAMEIIGEL
RPEQNVLAVIPSTDNMISSDAMKPDDVIVSLSGKTIEILNTDAEGRLVLA
DGITYAKQHGASVLVDVATLTGGVIVALGNEMTGAMTNNAAFYEQVAESA
KESGEPIWQLPITEKDKKRVRNSQMADLNNSPGREGHAIMAGTFLGEFAE
NTPWVHLDIAGTATANKATCFGPAGATGVMARTLAVLTERFTPE
Ligand information
Ligand IDCO3
InChIInChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-2
InChIKeyBVKZGUZCCUSVTD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(=O)([O-])[O-]
ACDLabs 10.04
CACTVS 3.341		[O-]C([O-])=O
FormulaC O3
NameCARBONATE ION
ChEMBL
DrugBankDB14531
ZINC
PDB chain7y1s Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7y1s Crystal structure of apo leucyl aminopeptidase from Bacillus amyloliquefaciens
Resolution2.748 Å
Binding residue
(original residue number in PDB)		A344 E345 G346 R347 L371
Binding residue
(residue number reindexed from 1)		A343 E344 G345 R346 L370
Annotation score3
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 22 17:13:19 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7y1s', asym_id = 'A', bs = 'BS01', title = 'Crystal structure of apo leucyl aminopeptidase from Bacillus amyloliquefaciens'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7y1s', asym_id='A', bs='BS01', title='Crystal structure of apo leucyl aminopeptidase from Bacillus amyloliquefaciens')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0005737,0006508,0019538,0030145,0046872,0070006', uniprot = '', pdbid = '7y1s', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005737,0006508,0019538,0030145,0046872,0070006', uniprot='', pdbid='7y1s', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>