Structure of PDB 7w5j Chain A Binding Site BS01
Receptor Information
>7w5j Chain A (length=340) Species:
63577
(Trichoderma atroviride) [
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TLSGERREIIRRALNKKILVPNILELMPAWPSEFQPNIDEVNVEIDEWLK
TVNVAKEKKLKHRARGNYTLLAGIYYPHCRKEKMLALSQFLYWIFFWDDE
IDREGTILCCAETNKCINDCLGPEPNYTPPPGSRGTVEMLYPILRDLRAG
LSPVSTMRLKQELHDYVNGVKNQHLPNPWDHFQMRVDDVGVIPSITQNEY
AMDFTLPDWIRRHEAMEEIVLQCTKLTILLNEILSLQKEFRVSQLENLCL
LFMNTYDMSIEQSIHKVLGLLKDHYKICIEAEARLPWSTTDEKLNNNIRE
YIRGCQRLATGTACWSYNCERYFKLSQLNDQQELLLDLSR
Ligand information
Ligand ID
FAR
InChI
InChI=1S/C15H26/c1-6-14(4)10-8-12-15(5)11-7-9-13(2)3/h6,9,12H,7-8,10-11H2,1-5H3/b14-6+,15-12+
InChIKey
JXBSHSBNOVLGHF-BUJBXKITSA-N
SMILES
Software
SMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0
CC=C(C)CCC=C(C)CCC=C(C)C
OpenEye OEToolkits 1.5.0
C\C=C(/C)\CC\C=C(/C)\CCC=C(C)C
CACTVS 3.341
C\C=C(C)\CC\C=C(C)\CCC=C(C)C
ACDLabs 10.04
C(=C/C)(\CC/C=C(/CC/C=C(\C)C)C)C
Formula
C15 H26
Name
FARNESYL
ChEMBL
DrugBank
ZINC
PDB chain
7w5j Chain A Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
7w5j
Structural insights into the cyclization of unusual brasilane-type sesquiterpenes.
Resolution
2.05 Å
Binding residue
(original residue number in PDB)
Y105 F125 D128 G235
Binding residue
(residue number reindexed from 1)
Y75 F95 D98 G190
Annotation score
1
Enzymatic activity
Enzyme Commision number
4.2.3.-
4.2.3.104
: alpha-humulene synthase.
4.2.3.137
: (E)-2-epi-beta-caryophyllene synthase.
4.2.3.157
: (+)-isoafricanol synthase.
4.2.3.182
: pristinol synthase.
4.2.3.57
: (-)-beta-caryophyllene synthase.
Gene Ontology
Molecular Function
GO:0016829
lyase activity
GO:0046872
metal ion binding
GO:0080016
(-)-E-beta-caryophyllene synthase activity
GO:0080017
alpha-humulene synthase activity
View graph for
Molecular Function
External links
PDB
RCSB:7w5j
,
PDBe:7w5j
,
PDBj:7w5j
PDBsum
7w5j
PubMed
35504416
UniProt
A0A5S9I252
|TATC6_HYPAT Terpene cyclase 6 (Gene Name=tatc6)
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