Structure of PDB 7uz2 Chain A Binding Site BS01

Receptor Information
>7uz2 Chain A (length=489) Species: 2287 (Saccharolobus solfataricus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MYSFPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSG
DLPENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDE
SKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYH
WPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLVDE
YSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRHMYNIIQAHARAYDGI
KSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWFFDAIIRGEITR
GNEKIVRDDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVS
LAGLPTSDFGWEFFPEGLYDVLTKYWNRYHLYMYVTENGIADDADYQRPY
YLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNT
KRLYWRPSALVYREIATNGAITDEIEHLNSVPPVKPLRH
Ligand information
Ligand IDOML
InChIInChI=1S/C7H11FO5/c8-3-2(1-9)4(10)6(12)7(13)5(3)11/h4-7,9-13H,1H2/t4-,5+,6+,7+/m1/s1
InChIKeySSCXFYOTIWXWGR-BWBBJGPYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385OCC1=C(F)[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 2.0.7C(C1=C([C@@H]([C@@H]([C@H]([C@@H]1O)O)O)O)F)O
ACDLabs 12.01OC1C(CO)=C(F)C(O)C(O)C1O
CACTVS 3.385OCC1=C(F)[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 2.0.7C(C1=C(C(C(C(C1O)O)O)O)F)O
FormulaC7 H11 F O5
Name(1R,2S,3R,4R)-5-fluoro-6-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol;
C5a-fluoro-valienide
ChEMBL
DrugBank
ZINC
PDB chain7uz2 Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7uz2 Vinyl Halide-Modified Unsaturated Cyclitols are Mechanism-Based Glycosidase Inhibitors.
Resolution1.83 Å
Binding residue
(original residue number in PDB)
Q18 H150 E206 W361 E387 W425 E432 W433 F441
Binding residue
(residue number reindexed from 1)
Q18 H150 E206 W361 E387 W425 E432 W433 F441
Annotation score1
Enzymatic activity
Enzyme Commision number 3.2.1.23: beta-galactosidase.
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004565 beta-galactosidase activity
GO:0008422 beta-glucosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7uz2, PDBe:7uz2, PDBj:7uz2
PDBsum7uz2
PubMed36940280
UniProtP22498|BGAL_SACS2 Beta-galactosidase (Gene Name=lacS)

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