Structure of PDB 7uml Chain A Binding Site BS01

Receptor Information
>7uml Chain A (length=379) Species: 11277 (Vesicular stomatitis Indiana virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ANEDPVEYPADYFRKSKEIPLYINTTKSLSDLRGYVYQGLKSGNVSIIHV
NSYLYGALKDIRGKLDKDWSSFGINIGKAGDTIGIFDLVSLKALDGVLPD
GVSDASRTSADDKWLPLYLLGLYRVGRTQMPEYRKKLMDGLTNQCKMINE
QFEPLVPEGRDIFDVWGNDSNYTKIVAAVDMFFHMFKKHECASFRYGTIV
SRFKDCAALATFGHLCKITGMSTEDVTTWILNREVADEMVQMMLPGQEID
KADSYMPYLIDFGLSSKSPYSSVKNPAFHFWGQLTALLLRSTRARNARQP
DDIEYTSLTTAGLLYAYAVGSSTNAPPQGRDVVEWLGWFEDQNRKPTPDM
MQYAKRAVMSLQGLREKTIGKYAKSEFDK
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7uml Visualizing molecular interactions that determine assembly of a bullet-shaped vesicular stomatitis virus particle.
Resolution3.5 Å
Binding residue
(original residue number in PDB)		R143 Y152 I218 D224 A226 K286 S290 S291 V292 H298 R312 N315 R317 R408
Binding residue
(residue number reindexed from 1)		R124 Y133 I199 D205 A207 K267 S271 S272 V273 H279 R293 N296 R298 R365
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0019083 viral transcription
GO:0039703 RNA replication
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:0030430 host cell cytoplasm
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7uml, PDBe:7uml, PDBj:7uml
PDBsum7uml
PubMed35970826
UniProtP03521|NCAP_VSIVA Nucleoprotein (Gene Name=N)

[Back to BioLiP]