Structure of PDB 7ui4 Chain A Binding Site BS01

Receptor Information

>7ui4 Chain A (length=413) Species: 115981 (Salmonella enterica subsp. enterica serovar Montevideo) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SKLKYFFPDSQDFIDPSFDFVRETRNEHRVRQRDDHYPHEVFPHPYDGML
VSKAVVDGLGGGESKYTRAQRLRYFRNGMKHFFRLPDNMQTMGDCGAFTY
VNQDVPPYRVEEVIEFYETSRFNYGVSLDHIIFGYEKPGESFSGEVLAEC
RRRQDITLTLAQDFLVKSQKSCFTPFGVAHGWNKKSYRQSVEALLAMGYK
NITMGGMVPLKTAQILETLEEIKPLLKSDTQVHLLGIARPESFADFIRLG
VTSIDSTTPLQQAFKDRKNNYHTPEGRAYTAVRVPQFDANPSLSRKIKSG
VIDQDVARHLEKDAMHALFEYDNNALSLEKTLEAVLAYERLHSGEKEAEK
IRADYERTLGDRPWRKCECNICRSIGINVIIFRGAERNRRRGFHNIQVLY
NRLQYTLSLRSED

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

7ui4 Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	7ui4 7-Deazaguanines in DNA: functional and structural elucidation of a DNA modification system.
Resolution	2.51 Å
Binding residue (original residue number in PDB)	C368 C370 C373 H395
Binding residue (residue number reindexed from 1)	C367 C369 C372 H394
Annotation score	4

Enzymatic activity

Enzyme Commision number

2.4.2.-

Gene Ontology

	Molecular Function
GO:0016757	glycosyltransferase activity
GO:0016763	pentosyltransferase activity
GO:0046872	metal ion binding

	Biological Process
GO:0006400	tRNA modification

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Molecular Function

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Biological Process

External links

PDB	RCSB:7ui4, PDBe:7ui4, PDBj:7ui4
PDBsum	7ui4
PubMed	36928176
UniProt	P0DW33\|DPDA_SALMO DNA-guanine transglycosylase (Gene Name=dpdA)

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