Structure of PDB 7rm7 Chain A Binding Site BS01
Receptor Information
>7rm7 Chain A (length=222) Species:
1280
(Staphylococcus aureus) [
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HHHHHSSGLVPRGSHMISKINGKLFADMIIQGAQNLSNNADLVDSLNVYP
VPDGDTGTNMNLTMTSGREEVENNLSKNIGELGKTFSKGLLMGARGNSGV
ILSQLFRGFCKNIESESEINSKLLAESFQAGVETAYKAVMKPVEGTILTV
AKDAAQAAIEKANNTEDCIELMEYIIVKANESLENTPNLLAVLKEVGVVD
SGGKGLLCVYEGFLKALKGEKV
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
7rm7 Chain A Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
7rm7
The X-ray crystal structure of the N-terminal domain of Staphylococcus aureus Fatty Acid Kinase A (FakA, residues 1-208) in complex with ADP to 1.025 Angstrom resolution
Resolution
1.025 Å
Binding residue
(original residue number in PDB)
N32 Y34 P35 D38 D40 T41 G81 N82 S83 I86 V128 T131 I132 L133 D185 G187
Binding residue
(residue number reindexed from 1)
N47 Y49 P50 D53 D55 T56 G96 N97 S98 I101 V143 T146 I147 L148 D200 G202
Annotation score
5
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004371
glycerone kinase activity
Biological Process
GO:0006071
glycerol metabolic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:7rm7
,
PDBe:7rm7
,
PDBj:7rm7
PDBsum
7rm7
PubMed
UniProt
Q2FZ58
|Y1193_STAA8 Uncharacterized protein SAOUHSC_01193 (Gene Name=SAOUHSC_01193)
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