Structure of PDB 7r8y Chain A Binding Site BS01

Receptor Information
>7r8y Chain A (length=228) Species: 32630 (synthetic construct) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HMMPVALTIAGSDSGGGAGIQADLKTFSALGVYGMSVITAVTAQNTLGVQ
GVHDIPPELVAAQIDAVFEDLRVDAVKTGMLSNAEIVEAVAEALRRYGVR
PLVVDPVMVAKSGDPLLAPDAVEALKERLFPLATIITPNLPEAEVLLGRP
IRTEEEMEEAARRLLALGPKAVLLKGGAVDLLADGEGIHRFSTGCTLSAA
IAAHLARGHDLPEAVREAKAYLTGAIKA
Ligand information
Ligand IDHMH
InChIInChI=1S/C6H9N3O/c1-4-8-2-5(3-10)6(7)9-4/h2,10H,3H2,1H3,(H2,7,8,9)
InChIKeyVUTBELPREDJDDH-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04n1c(N)c(cnc1C)CO
OpenEye OEToolkits 1.5.0Cc1ncc(c(n1)N)CO
CACTVS 3.341Cc1ncc(CO)c(N)n1
FormulaC6 H9 N3 O
Name4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE
ChEMBLCHEMBL1233354
DrugBankDB02022
ZINCZINC000000895559
PDB chain7r8y Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7r8y Ancestral protein AncThEn of Phosphomethylpyrimidine Kinases family
Resolution3.2 Å
Binding residue
(original residue number in PDB)		G9 A16 G17 Q42 L114
Binding residue
(residue number reindexed from 1)		G11 A18 G19 Q44 L116
Annotation score2
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 04:27:43 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7r8y', asym_id = 'A', bs = 'BS01', title = 'Ancestral protein AncThEn of Phosphomethylpyrimidine Kinases family'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7r8y', asym_id='A', bs='BS01', title='Ancestral protein AncThEn of Phosphomethylpyrimidine Kinases family')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0008972,0009228', uniprot = '', pdbid = '7r8y', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008972,0009228', uniprot='', pdbid='7r8y', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>