Structure of PDB 7r8j Chain A Binding Site BS01

Receptor Information
>7r8j Chain A (length=764) Species: 2029104 (Pseudooceanicola lipolyticus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTLETTLFPLEGTGACGASYQLYAVKGLSGLDETEYHKNVNLLVRRLSFS
MKAPFVALSRDGEQFIAVPNYVTEFPVDHRVVRAMVKLVPTGEPLNLRFD
AADDEYDGLRLRYLDFVLQQPLFANHHLWQPGSGQPFFHKKPLKRLDDVD
LYDGVSVRAAKHPEGGFGIVCDARSKFITHTPIGARADRKRLGKLINRSC
LYKMGDHWYQFRIDAVSDWKVGEPSLFEGNVPISLAQQLVRTAGNAAPKS
IIDLDPEGGALEYFTSTNERRMAPAELCFLIEDTHGRRAAKLQRQTILSP
SERRARVNGFIRRYLSELNIGGAKLSAGARAHAFFTETHMPPALSFGNGT
VLAPDTSKDRFQAMQEYSSMRRTMMLDKKVGFFHQDVFPPQTLLLPESVK
KSWGPAFASDFVGTVQELYPAGGYRPEIIEYRDKAYGGGVPGQMKALLEV
AERGEIKSGDVLVMLHRINGAPRAQDKLAAMVCNEFEKRFGKRVQVIHSD
SPGRGYKRIFKNDKPTYVQQRGRGVNIKGYLKGAALNKVCLGNSRWPFVL
RDPLNADVTIGIDVKNNMAVFTMVAEGGRIVRVQRSRSRQREQLLESQVT
QVITEMLSKELPEIKKQVQRVVIHRDGRAWPAEIAGARKTFADMAESGLI
AVDADVSVFEVLKSSPAPLRLFSFEEPTQENPKGVINPVLGSWLKLSEND
GYICTTGAPLLLQGTADPLHVRKAFGPMAIEDALKDVFDLSCLTWPKPDS
CMRLPLTIKLCDIA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7r8j Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity.
Resolution2.7 Å
Binding residue
(original residue number in PDB)
R45 F49 R112 F116 Q119 Q120 F123 S133 S175 K176 Y202 M204 Y209 Q238 S266 R271 M272 H285 Q293 T296 I297 R303 R473 I497 H498 S501 Y530 N537 K538 R670 T706 Q713 T715 A716 D717 P746 K747 S750 C751 R753
Binding residue
(residue number reindexed from 1)
R45 F49 R112 F116 Q119 Q120 F123 S133 S175 K176 Y202 M204 Y209 Q238 S266 R271 M272 H285 Q293 T296 I297 R303 R473 I497 H498 S501 Y530 N537 K538 R670 T706 Q713 T715 A716 D717 P746 K747 S750 C751 R753
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:7r8j, PDBe:7r8j, PDBj:7r8j
PDBsum7r8j
PubMed35941106
UniProtA0A2M8J4C7

[Back to BioLiP]