Structure of PDB 7qth Chain A Binding Site BS01
Receptor Information
>7qth Chain A (length=627) Species:
211586
(Shewanella oneidensis MR-1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GSIQTLNLDITKVSYENGAPMVTVFATNEADMPVIGLANLEIKKALQLIP
EGATGPGNSANWQGLGSSKSYVDNKNGSYTFKFDAFDSNKVFNAQLTQRF
NVVSAAGKLADGTTVPVAEMVEDFDGQGNAPQYTKNIVSHEVCASCHVEG
EKIYHQATEVETCISCHTQEFADGRGKPHVAFSHLIHNVHNANKAWGKDN
KIPTVAQNIVQDNCQVCHVESDMLTEAKNWSRIPTMEVCSSCHVDIDFAA
GKGHSQQLDNSNCIACHNSDWTAELHTAKTTATKNLINQYGIETTSTINT
ETKAATISVQVVDANGTAVDLKTILPKVQRLEIITNVGPNNATLGYSGKD
SIFAIKNGALDPKATINDAGKLVYTTTKDLKLGQNGADSDTAFSFVGWSM
CSSEGKFVDAADPAFDGVDVTKYTGMKADLAFATLSGKAPSTRHVDSVNM
TACANCHTAEFEIHKGKQHAGFVMTEQLSHTQDANGKAIVGLDACVTCHT
PDGTYSFANRGALELKLHKKHVEDAYGLIGGNCASCHSDFNLESFKKKGA
LNTAAAADKTGLYSTPITATCTTCHTVGSQYMVHTKETLESFGAVVDGTK
DDATSAAQSETCFYCHTPTVADHTKVK
Ligand information
Ligand ID
HEC
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKey
HXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0
CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341
C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341
CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
Formula
C34 H34 Fe N4 O4
Name
HEME C
ChEMBL
DrugBank
ZINC
PDB chain
7qth Chain A Residue 801 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7qth
A Cysteine Pair Controls Flavin Reduction by Extracellular Cytochromes during Anoxic/Oxic Environmental Transitions.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
C186 C189 H190 I196 Y197 I229 V232 H233 W239 A249 I252 L571
Binding residue
(residue number reindexed from 1)
C143 C146 H147 I153 Y154 I186 V189 H190 W196 A206 I209 L528
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:7qth
,
PDBe:7qth
,
PDBj:7qth
PDBsum
7qth
PubMed
36645302
UniProt
Q8EG34
[
Back to BioLiP
]