Structure of PDB 7p4q Chain A Binding Site BS01
Receptor Information
>7p4q Chain A (length=303) Species:
243274
(Thermotoga maritima MSB8) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HHHHHMVDEILKLKKEKGYIILAHNYQIPELQDIADFVGDSLQLARKAME
LSEKKILFLGVDFMAELVKILNPDKKVIVPDRSATCPMANRLTPEIIREY
REKFPDAPVVLYVNSTSECKTLADVICTAANAVEVVKKLDSSVVIFGPDR
NLGEYVAEKTGKKVITIPENGHCPVHQFNAESIDAVRKKYPDAKVIVHPE
CPKPVRDKADYVGSTGQMEKIPERDPSRIFVIGTEIGMIHKLKKKFPDRE
FVPLEMAVCVNMKKNTLENTLHALQTESFEVILPKEVIEKAKKPILRMFE
LMG
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
7p4q Chain A Residue 301 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7p4q
Transient Formation of a Second Active Site Cavity during Quinolinic Acid Synthesis by NadA.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
Y21 C81 N109 C168 V170 C254
Binding residue
(residue number reindexed from 1)
Y26 C86 N114 C173 V175 C259
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.5.1.72
: quinolinate synthase.
Gene Ontology
Molecular Function
GO:0008987
quinolinate synthetase A activity
GO:0016740
transferase activity
GO:0016765
transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046872
metal ion binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0009435
NAD biosynthetic process
GO:0019363
pyridine nucleotide biosynthetic process
GO:0019805
quinolinate biosynthetic process
GO:0034628
'de novo' NAD biosynthetic process from aspartate
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7p4q
,
PDBe:7p4q
,
PDBj:7p4q
PDBsum
7p4q
PubMed
34609124
UniProt
Q9X1X7
|NADA_THEMA Quinolinate synthase (Gene Name=nadA)
[
Back to BioLiP
]