Structure of PDB 7oye Chain A Binding Site BS01
Receptor Information
>7oye Chain A (length=209) Species:
9031
(Gallus gallus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MNIFRLTGDLSHLAAIIILLLKIWKSRSCAGISGKSQLLFALVFTTRYLD
LFTSFISLYNTSMKLIYIACSYATVYLIYMKFKATYDGNHDTFRVEFLIV
PVGGLSFLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTH
YLFFLGLYRALYLVNWIWRYYFEGFFDLIAVVAGVVQTVLYCDFFYLYVT
KVLKGKKLS
Ligand information
>7oye Chain B (length=6) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
AEHDEL
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7oye
Crystal structure of the KDEL receptor bound to HDEL peptide at pH 7.0
Resolution
2.62 Å
Binding residue
(original residue number in PDB)
R5 D9 Y48 M63 E117 W120 N165 W166 R169
Binding residue
(residue number reindexed from 1)
R5 D9 Y48 M63 E117 W120 N165 W166 R169
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005046
KDEL sequence binding
GO:0046923
ER retention sequence binding
Biological Process
GO:0006621
protein retention in ER lumen
GO:0006888
endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890
retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031
protein transport
GO:0016192
vesicle-mediated transport
GO:0035437
maintenance of protein localization in endoplasmic reticulum
Cellular Component
GO:0000139
Golgi membrane
GO:0005783
endoplasmic reticulum
GO:0005789
endoplasmic reticulum membrane
GO:0005794
Golgi apparatus
GO:0005801
cis-Golgi network
GO:0016020
membrane
GO:0030663
COPI-coated vesicle membrane
GO:0031410
cytoplasmic vesicle
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7oye
,
PDBe:7oye
,
PDBj:7oye
PDBsum
7oye
PubMed
38626766
UniProt
Q5ZKX9
|ERD22_CHICK ER lumen protein-retaining receptor 2 (Gene Name=KDELR2)
[
Back to BioLiP
]