Structure of PDB 7on4 Chain A Binding Site BS01

Receptor Information
>7on4 Chain A (length=308) Species: 1280 (Staphylococcus aureus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHMATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAES
KIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGG
GTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAA
VDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEV
NLDFADVKTIMSNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGA
QGVLMNITGGESLSLFEAQEAADIVQDAADEDVNMIFGTVINPELQDEIV
VTVIATGF
Ligand information
Ligand IDGDP
InChIInChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKeyQGWNDRXFNXRZMB-UUOKFMHZSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
CACTVS 3.385NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
CACTVS 3.385NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 12.01O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)C(O)C3O
OpenEye OEToolkits 1.7.6c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
FormulaC10 H15 N5 O11 P2
NameGUANOSINE-5'-DIPHOSPHATE
ChEMBLCHEMBL384759
DrugBankDB04315
ZINCZINC000008215481
PDB chain7on4 Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7on4 FtsZ filament structures in different nucleotide states reveal the mechanism of assembly dynamics.
Resolution1.79 Å
Binding residue
(original residue number in PDB)		G20 G21 G22 N25 G104 T109 G110 P135 E139 R143 N166 F183
Binding residue
(residue number reindexed from 1)		G13 G14 G15 N18 G97 T102 G103 P128 E132 R136 N159 F176
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding

View graph for
Molecular Function
External links
PDB RCSB:7on4, PDBe:7on4, PDBj:7on4
PDBsum7on4
PubMed35312677
UniProtQ2FZ89|FTSZ_STAA8 Cell division protein FtsZ (Gene Name=ftsZ)

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