Structure of PDB 7omb Chain A Binding Site BS01 |
| >7omb Chain A (length=756) Species: 69014 (Thermococcus kodakarensis KOD1)
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MILDTDYITEDGKPVIRIFKKENGEFKIEYDRTFEPYFYALLKDDSAIEE
VKKITAERHGTVVTVKRVEKVQKKFLGRPVEVWKLYFTHPQDVPAIRDKI
REHPAVIDIYEYDIPFAKRYLIDKGLVPMEGDEELKMLAFAIATLYHEGE
EFAEGPILMISYADEEGARVITWKNVDLPYVDVVSTEREMIKRFLRVVKE
KDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPKIQRMGDRFAV
EVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTAWE
TGENLERVARYSMEDAKVTYELGKEFLPMEAQLSRLIGQSLWDVSRSSTG
NLVEWFLLRKAYERNELAPNKPDEKELARRRQSYEGGYVKEPERGLWENI
VYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPQVGHRFCKDFPGFIP
SLLGDLLEERQKIKKKMKATIDPIERKLLDYRQRAIKILANSYYGYYGYA
RARWYCKECAESVTAWGREYITMTIKEIEEKYGFKVIYSDTDGFFATIPG
ADAETVKKKAMEFLKYINAKLPGALELEYEGFYKRGFFVTKKKYAVIDEE
GKITTRGLEIVRRDWSEIAKETQARVLEALLKDGDVEKAVRIVKEVTEKL
SKYEVPPEKLVIHEQITRDLKDYKATGPHVAVAKRLAARGVKIRPGTVIS
YIVLKGSGRIGDRAIPFDEFDPTKHKYDAEYYIENQVLPAVERILRAFGY
RKEDLR |
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| PDB | 7omb Structural Basis for The Recognition of Deaminated Nucleobases by An Archaeal DNA Polymerase. |
| Resolution | 2.01 Å |
Binding residue
(original residue number in PDB) | Y7 I8 T9 P115 K118 K240 Q242 R243 M244 G245 S348 T349 G350 N351 W355 S383 Y384 E385 G386 G387 V389 S492 G495 G498 Y499 T590 K591 K592 K593 W615 P678 R709 I710 G711 Y731 R743 |
Binding residue
(residue number reindexed from 1) | Y7 I8 T9 P115 K118 K240 Q242 R243 M244 G245 S348 T349 G350 N351 W355 S383 Y384 E385 G386 G387 V389 S492 G495 G498 Y499 T590 K591 K592 K593 W615 P678 R709 I710 G711 Y731 R743 |
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