Structure of PDB 7o6z Chain A Binding Site BS01

Receptor Information
>7o6z Chain A (length=588) Species: 2730359 (Methylacidimicrobium sp. AP8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NDDVLKLTENPKNWAAPGKDYANTRHSPLKQINTQNVKGLHMAWSFSTGV
LRGHEGQPLVIGDRMYVVTPYPNIVWALDISKGNSYEVLWKYAPRQDDKA
VSTACCDTVNRGASYADGKIVFNTLDGYVVCLDANTGKELWKTKFADVNK
GETSTPAPIIVKDKVVTGYGGDEFGARGRFAAFDLNSGKMVWQAYSNGPD
SDVLLGPDFNSKHPEYGQAGQDLGVKTYPDEEWKRGGGCAWGWYSYDPKL
DLIYYNTGNPGLWSPSYRTEAKTHEEANEPWKWDNKWSMTIFARKPDTGE
AVWGYQMTPFDQWDYDGINEDVLVDITVDGSKKPCLVHFDRNGFCYVLNR
TDGTIIRANKFVTVNWAEKIDMKTGRPVKVKEHSPFEVGKAVQAYPSAMG
GKDQQPVAVDPKEPNVFYAPTNNWGMTLEPMERAHTNQGSVYVFANVLMK
PEKPGVMGRFKAFDVITGKARWDIPERFPTWSGALVTDGGLAFYGTLDGW
FKAVDRKTGKVLWQQKLGSGIIGNPISYEVGGKQYISVLSGIGGWIGLPV
TAGLDPADPYGALGVSGMAAENGFYNIPMGGTLYTFCV
Ligand information
Ligand IDND
InChIInChI=1S/Nd/q+3
InChIKeyUYIXUPGBIXNDHN-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01
CACTVS 3.385
OpenEye OEToolkits 2.0.7		[Nd+3]
FormulaNd
NameNeodymium Ion
ChEMBL
DrugBank
ZINC
PDB chain7o6z Chain A Residue 801 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7o6z Neodymium as Metal Cofactor for Biological Methanol Oxidation: Structure and Kinetics of an XoxF1-Type Methanol Dehydrogenase.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		E204 N290 D345 D347
Binding residue
(residue number reindexed from 1)		E173 N259 D314 D316
Annotation score1
Enzymatic activity
Enzyme Commision number 1.1.2.7: methanol dehydrogenase (cytochrome c).
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function
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Cellular Component
External links
PDB RCSB:7o6z, PDBe:7o6z, PDBj:7o6z
PDBsum7o6z
PubMed34544276
UniProtA0A7R8L7W4

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