Structure of PDB 7nyz Chain A Binding Site BS01

Receptor Information

>7nyz Chain A (length=1467) Species: 230089 (Photorhabdus thracensis)

IERGKFRSLTLVNWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTAL
IPDLTLLHFRNTTEAGATSGSRDKGLHGKLRAGVCYSTLDVINSRHQRVV
VGVRLQQVAGRDRKVDIKPFMIQGLPTAIQPTQLLTENVGERQARVLPLN
ELKDRLDEMEGVQFKQFNSITDYHAQMFDLGVIPKRLRSASDRSKFYRLI
EASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALRENRITLEAIRV
TQSDRDLFKHLITEATSYVSADYMRHANERRTHLDEALALRGELFGSHKQ
LATEQYRHVEMARELAEQSGASSDLETDHQAASDHLNLVQTAMRQQEKID
RYQVDLEELSYRLEEQTDVVEEAGELQAEYEARTEATEQEVDELKSQLAD
YQQALDVQQTRAIQYQQALQALERARELCRLPDLSVDNAEEWLETFQAKE
QQATEALLALEQKLSVADAAHNQFEQAYQLVKNIVGETSRSEAWQSAREL
LRDWPSQRHLADRVQPLRMRLSELEQRLNNQQNAERLLSEFCKRQGRQYQ
AEDLEALQNELEARQEALSLSVNEGGERRMEMRQELEQLKQKIQSLTARA
PVWLAAQDTLNQLCEQSGETLASSNDVTEYMQQLLEREREATVERDEVAA
QKRELEKQIERLSQPSGAEDSRMIALAERFGGVLLSEIYDDITIDDAPYF
SALYGPARHGIVVPDLSLVRPHLETLEDCPEDLYLIEGDPQSFDDSVFNA
EEQTNAVLVKSSDRQWRYSRYPELPLFGRAARENRLEALNLERDALAERY
ATLSFDVQKIQRAHQAFSQFVGKHLSVAFDTDPEAEIRELRQRHTELERE
VSRFEDQTQQQRQQYAQAKESLTTLNRLIPQVTLLLDETLIDRVEEVREE
MDEAQEAARFLQQHGSALTKLEPMVAVLQSDPQQHEQLQQDYETAKHSQH
QAKQQAFALVEIVQRRVHFSYSDSAGMLSENADLNDKLRQRLEHAESDRS
RAREQLRQQQAQYSQFNQVLASLKSSYETKQDMLKELLQEMKDIGVQADA
NAEMRARERRDRLHEALSVNRSRVNQLEKQIAFCEAEMENVQKKLRKLER
DYYQIREQVVSAKAGWCAVMRMVKDNGVERRLHRRELAYMEGGALRSMSD
KALGALRLAVADNEHLRDALRLSEDPKRPERKVQFFIAVYQHLRERIRQD
IIRTDDPVDAIEQMEIELARLTEELTAREQKLAISSKSVANIIRKTIQRE
QNRIRMLNQGLQAVSFGQVRGVRLNVNVRESHAILLDVLSEQQEQHQDLF
NSQRLTFSEAMAKLYQRLNPQVDMGQRLPQTIGEELLDYRNYLELDVEVN
RGSDGWLKAESGALSTGEAIGTGMSILVMVVQSWEEESRRLRGKDISPCR
LLFLDQAARLDAKSIATLFELCERLQMQLIIAAPENISPEKGTTYKLVRK
VFKNHEHVHVVGLRGFG

Ligand information

>7nyz Chain M (length=30)

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Receptor-Ligand Complex Structure

Structure summary

• PDB: 7nyz Cryo-EM structure of MukBEF reveals DNA loop entrapment at chromosomal unloading sites.
• Resolution: 6.5 Å
• Binding residue (original residue number in PDB): H59 R73 R199
• Binding residue (residue number reindexed from 1): H58 R72 R198

Gene Ontology

Molecular Function

• GO:0003677 DNA binding
• GO:0005524 ATP binding

Biological Process

• GO:0006260 DNA replication
• GO:0007059 chromosome segregation
• GO:0030261 chromosome condensation
• GO:0051301 cell division

Cellular Component

• GO:0005737 cytoplasm
• GO:0009295 nucleoid

External links

• PDB: RCSB:7nyz, PDBe:7nyz, PDBj:7nyz
• PDBsum: 7nyz
• PubMed: 34739874
• UniProt: A0A0F7LRY2