Structure of PDB 7n9j Chain A Binding Site BS01
Receptor Information
>7n9j Chain A (length=276) Species:
10090
(Mus musculus) [
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PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPL
GKEQNYTCRVYHEGLPEPLTLRWEPP
Ligand information
>7n9j Chain C (length=9) Species:
10090
(Mus musculus) [
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YGFRNVVHI
Receptor-Ligand Complex Structure
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PDB
7n9j
Structure of the complex between H2DB and melanoma HSF2 neoantigen YGFRNVVHI
Resolution
1.74 Å
Binding residue
(original residue number in PDB)
M5 Y7 E63 K66 G69 Q70 W73 V76 S77 N80 L81 Y84 Q97 T143 K146 W147 S150 H155 Y156 Y159 E163 W167 Y171
Binding residue
(residue number reindexed from 1)
M4 Y6 E62 K65 G68 Q69 W72 V75 S76 N79 L80 Y83 Q96 T142 K145 W146 S149 H154 Y155 Y158 E162 W166 Y170
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:7n9j
,
PDBe:7n9j
,
PDBj:7n9j
PDBsum
7n9j
PubMed
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
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