Structure of PDB 7mxh Chain A Binding Site BS01

Receptor Information
>7mxh Chain A (length=281) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SEHVSFHVIQIFSFVNQSWARGQGSGWLDELQTHGWDSESGTIIFLHQWS
KGQFSNEELSDLELLFRFYLFGLTREIQDHASQDYSKYPFEVQVKAGCEL
HSGGSPEGFFQVAFNGLDLLSFQQTTWVPSPGCGSLAQSVCHLLNHQYEG
VTETVYNLIRSTCPRFLLGLLDAGKMYVHRQVRPEAWLSSGPSPGPGRLQ
LVCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILPNANGTWYLRATLDVAD
GEAAGLSCRVKHSSLEGQDIILYWRGSLVPR
Ligand information
Ligand IDZQ7
InChIInChI=1S/C39H77F2O8P/c1-7-8-9-10-11-17-29(2)18-12-19-30(3)20-13-21-31(4)22-14-23-32(5)24-15-25-33(6)26-16-27-48-50(46,47)39(40,41)38-37(45)36(44)35(43)34(28-42)49-38/h29-38,42-45H,7-28H2,1-6H3,(H,46,47)/t29-,30-,31-,32-,33-,34+,35+,36-,37-,38+/m0/s1
InChIKeyWLSJJMZOYIFPGE-ICHHDKBFSA-N
SMILES
SoftwareSMILES
CACTVS 3.385CCCCCCC[CH](C)CCC[CH](C)CCC[CH](C)CCC[CH](C)CCC[CH](C)CCCO[P](O)(=O)C(F)(F)[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 2.0.7CCCCCCC[C@H](C)CCC[C@H](C)CCC[C@H](C)CCC[C@H](C)CCC[C@H](C)CCCOP(=O)(C([C@H]1[C@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O)(F)F)O
CACTVS 3.385CCCCCCC[C@H](C)CCC[C@H](C)CCC[C@H](C)CCC[C@H](C)CCC[C@H](C)CCCO[P](O)(=O)C(F)(F)[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1O
ACDLabs 12.01OP(=O)(OCCCC(C)CCCC(C)CCCC(C)CCCC(C)CCCC(C)CCCCCCC)C(F)(F)C1OC(CO)C(O)C(O)C1O
OpenEye OEToolkits 2.0.7CCCCCCCC(C)CCCC(C)CCCC(C)CCCC(C)CCCC(C)CCCOP(=O)(C(C1C(C(C(C(O1)CO)O)O)O)(F)F)O
FormulaC39 H77 F2 O8 P
Name2,6-anhydro-1-deoxy-1,1-difluoro-1-[(R)-hydroxy{[(4S,8S,12S,16S,20S)-4,8,12,16,20-pentamethylheptacosyl]oxy}phosphoryl]-D-glycero-D-galacto-heptitol
ChEMBL
DrugBank
ZINC
PDB chain7mxh Chain A Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7mxh Rational design of a hydrolysis-resistant mycobacterial phosphoglycolipid antigen presented by CD1c to T cells.
Resolution2.11 Å
Binding residue
(original residue number in PDB)
V12 Q14 L69 F70 F72 Y73 F170
Binding residue
(residue number reindexed from 1)
V8 Q10 L65 F66 F68 Y69 F166
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:7mxh, PDBe:7mxh, PDBj:7mxh
PDBsum7mxh
PubMed34536421
UniProtP29016|CD1B_HUMAN T-cell surface glycoprotein CD1b (Gene Name=CD1B);
P29017|CD1C_HUMAN T-cell surface glycoprotein CD1c (Gene Name=CD1C)

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