Structure of PDB 7m08 Chain A Binding Site BS01
Receptor Information
>7m08 Chain A (length=325) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
WVCAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKS
FHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELF
SNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMP
REEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGR
SHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRR
LDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAGRV
LPTPTEKDVFRLLGLPYREPAERDW
Ligand information
>7m08 Chain T (length=11) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cggcagtactg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7m08
Comprehensive structural survey of DNA double-strand break synapsis by DNA Polymerase Lambda
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
W274 V462 S463 Q464 Q471 K472 R514 R517 L527 S528 H530
Binding residue
(residue number reindexed from 1)
W36 V224 S225 Q226 Q233 K234 R276 R279 L289 S290 H292
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
4.2.99.-
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003887
DNA-directed DNA polymerase activity
GO:0016779
nucleotidyltransferase activity
GO:0034061
DNA polymerase activity
Biological Process
GO:0006281
DNA repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:7m08
,
PDBe:7m08
,
PDBj:7m08
PDBsum
7m08
PubMed
UniProt
Q9UGP5
|DPOLL_HUMAN DNA polymerase lambda (Gene Name=POLL)
[
Back to BioLiP
]