Structure of PDB 7ljj Chain A Binding Site BS01

Receptor Information
>7ljj Chain A (length=556) Species: 484018 (Phocaeicola plebeius DSM 17135) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KGTDVFKADSASIAQNYTIPEWFKDAKFGIFIHWGVYSVPAYGSEWYSRW
MYKEGHPINKYHVQTYGPLTKFGYKDFIPMFKAENFNADEWLAVVKSSGA
QYIVPVAEHHDGFAMYSSTFNKWNAVDMGPKRDIIGELKEATKKAGLRFG
LSSHRCENAWFYEYGMETPSDVQDTTITLYGERLHEPEGQGMTPYCGKYE
GSNERSRRQFLMHTYELIDKYQPELIWFDWTVGKYPFQPTFYKFMAYYYN
SALDWNKEVVVNTKFGYGDNIQVFDIERGKSDRIREYPWQTDTSVGKKSW
SYCVGEENKSPDHIIDDFVDIVSKNGNLLLNIGPKADGTITDEQKNVLAE
IGKWLKTNGEAIYGSRPWVIASEGHNGYMTDNTKTEYTADDIRFTTCDNN
LYAVSLAWTDGSVTIKSLATKYCRNVEIESVEMLGSSEKIDYKMTDEGLV
VNFPKNKPTEYAHVFKIKLKGVVVSKPLYDKVDNGCLITVRVANHNAEDA
NVTLKSVVDGNEVSTQVAVKAKSEQWVKMQNKDVKSFDDMSCKFYFNDNL
TYENEF
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain7ljj Chain A Residue 604 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7ljj Metabolism of a hybrid algal galactan by members of the human gut microbiome.
Resolution1.9 Å
Binding residue
(original residue number in PDB)
D347 D351 L445 Y500
Binding residue
(residue number reindexed from 1)
D312 D316 L406 Y461
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004560 alpha-L-fucosidase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006004 fucose metabolic process

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Molecular Function

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Biological Process
External links
PDB RCSB:7ljj, PDBe:7ljj, PDBj:7ljj
PDBsum7ljj
PubMed35289327
UniProtB5CYA5

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