Structure of PDB 7kn8 Chain A Binding Site BS01

Receptor Information
>7kn8 Chain A (length=707) Species: 190485 (Xanthomonas campestris pv. campestris str. ATCC 33913) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PYQWRSVAIGGGGFVTGVLFHPAERGLAYARTDVGGAYRWDAQAQQWTAL
TDWLGADDWNLMGIDAFAVDPADADALYLAAGTYMHERAGNAAVLRSFNR
GRTFERADLPFKLGGNQLGRANGERLAVDPHDGRVLLLGSRDAGLWRSDD
RGAHWAKVASFPDAALAGATARNHVGREQAVGIAFVVFDAASGNTGTPTP
RIYVGVSTEQTSLYVSEDAGRSWAPVAGQPRGLRPSHMAGGSDGHWYLSY
GDQPGPDLMAGGALWKFTPAQGRWREISPIPQPASGDGFGWGAVAVDPQQ
PQVLLASTFRRRTPRDELYRSVDGGKHWAPLLADAVFDHSAAPWTAHATP
HWMGALAIDPFDGNHALFVTGYGIWASRNLQDFAAPQRPLQWWFQDRGLE
ETVPLDLLSPMAGAHLLSALGDIDGFRHDELDRAQLQYAGPRLTNGESID
AAGQAPQWVVRSGTVRDRRNNEIRALYSRDGGKQWTAFASEPPAGQGAGS
IAIGADAAQVVWAPERGGNWRTSDFGAQWQRVDGLPDTAVVMADRVDARR
WYAVDVASGQLYESTDAARSFRATGVQVGSPARDERTRPQLRPDPWRAGV
VYLASPGKGVMRWQDGTLQVLSQPDEARSLGIGKALRAGAPPALYLAGRV
QGVDGVFRSDDGGVQWQRINDDAHRFGRPYSVTGDPRIAGRVYFATGGRG
IFYGDPR
Ligand information
Ligand IDBGC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL1614854
DrugBankDB02379
ZINCZINC000003833800
PDB chain7kn8 Chain C Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7kn8 Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Resolution1.95 Å
Binding residue
(original residue number in PDB)		R356 H395 R510
Binding residue
(residue number reindexed from 1)		R312 H351 R466
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0000272 polysaccharide catabolic process
GO:0010411 xyloglucan metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7kn8, PDBe:7kn8, PDBj:7kn8
PDBsum7kn8
PubMed
UniProtQ8P9U5

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