Structure of PDB 7jjn Chain A Binding Site BS01

Receptor Information
>7jjn Chain A (length=514) Species: 657318 (Agathobacter rectalis DSM 17629) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YKPSAMEQMNAKNDPNVIQDNYRTCYEVFVYSFFDSDGDGIGDLKGLTEK
LDYIEGLGCNEIWMMPIMPSPSYHKYDITDYMNIDKQYGTLDDFDALITE
CHKRNINVIIDFVINHTSNEHPWFKAAADYIKSLPDGAEPDSSECPYVDY
YNFSKTNTGGYNQLPGTNWYYESQFVDSMPDLNLQSEAVRGEIDKVTSFW
LDRGVDGFRLAAVIYYNNNNQTETIDDLTWLVNNVKSKKADAYMVGEGWT
TYREYAKYYKSGIDSMFNFDFSQQDGYIGKVLNGAANHGASTYGNALVDV
ENEIKKYTDSYIDAPFYTNHDMGRSAGYYNGDNAEEKTKMAQAMNLLMPG
NAFLYYGEEIGMRGTANDETKRLAMRWSGDSKAKGMCVGPQNAEETEQTY
DTLDKQMEDPYSIYNFVKQTISIRNAFPEIARGTNTFEKDLSNDNVCIFT
REYNGEKAVLIFNPSKDEASVDVSSLGVNDAVAMLQTTAAAPSYKDGTAK
LPAYSVLVLKENLY
Ligand information
Ligand IDBGC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL1614854
DrugBankDB02379
ZINCZINC000003833800
PDB chain7jjn Chain D Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7jjn The structures of the GH13_36 amylases from Eubacterium rectale and Ruminococcus bromii reveal subsite architectures that favor maltose production
Resolution2.25 Å
Binding residue
(original residue number in PDB)		Y130 H170 F229 R263 A265 E301 H374 D375
Binding residue
(residue number reindexed from 1)		Y76 H116 F175 R209 A211 E247 H320 D321
Annotation score4
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Wed Nov 27 18:01:10 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7jjn', asym_id = 'A', bs = 'BS01', title = 'The structures of the GH13_36 amylases from Euba...site architectures that favor maltose production '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7jjn', asym_id='A', bs='BS01', title='The structures of the GH13_36 amylases from Euba...site architectures that favor maltose production ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0005975', uniprot = '', pdbid = '7jjn', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005975', uniprot='', pdbid='7jjn', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>