Structure of PDB 7fj3 Chain A Binding Site BS01

Receptor Information
>7fj3 Chain A (length=1308) Species: 10345 (Suid alphaherpesvirus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MERPAILPSGQILSNIEVHSHRALFDIFKRFRSDDNNLYGAEFDALLGTY
CSTLSLVRFLELGLSVACVCTKFPELSYVAEGTIQFEVQQPMIARDGPHP
ADQPVHNYMIKRLDRRSLNAAFSIAVEALGLISGENLDGTHISSAMRLRA
IQQLARNVQAVLDSFERGTADQMLRVLMEKAPPLSLLAPFTLYEGRLADR
VACAALVSELKRRVRDDTFFLTKHERNKDAVLDRLSDLVNCTAPSVAVAR
MTHADTQGRPVDGVLVTTAGVRQRLLHHVLTLADTHADVPVTYGEMVIAN
TNLVTALVMGKAVSNMDDVARYLLGGVGSARVRADLVVVGDRLVFLEALE
KRVYQATQVPYPLVGNLDVTFVMPLGVFKPAADRYARHAGSFAPTPGLPD
PRTHPPRAVHFFNKDGVPCHVTFEHAMGTLCHPSFLDVDATLAALRQEPA
EVQCAFGAYVADARPDALVGLMQRFLEEWPGMMPVRPRWAAPAAADQLLA
PGNADLRLELHPAFDFFVAPEVDVPGPFAVPQVMGQVRAMPRIINGNIPL
ALCPVDFRDARGFELSVDRHRLAPATVAAVRGAFRDANYPMVFYIIEAVI
HGSERTFCALARLVAQCIQSYWRNTHNAAFVNNFYMVMYINTYLGNGELP
EDCAAVYKDLLEHVHALRRLIGEFTLPGDPLGNQPQEELNHALADATLLP
PLIWDCDPILYRDGLAERLPELRVNGAHFQHILWVEMAQVNFRNVGGGLV
HNRPVRNENQPLHPHHDAEWSVLSKIYYYAVVPAFSRGNCCTMGVRYDRV
YQLVQTMVVPETDEEVGTDDPRHPLHPRNLVPNSLNVLFHNACVAVDADA
MLILQETVTNMAERTTPLLASVAPDAGMATVATRDMRTHDGSLHHGLLMM
AYQPNDATLLEGAFFYPAPVNALFACADHLGAMRDVGAEVRAAAQHVPCV
PHFLGANYYATVRQPVAQHAAQSRADENTLSYALMAGYFKMSPVAFTHQL
RRQLHPGFALTVVRQDRFATENVLFAEKASESYFMGQMQVARTESGGGLH
LQLTQPRANVDLGVGFTAAYAAAALRAPVTDMGNLPQNLFATRGAPPMLD
ADADDYLRRTVNAGNRLAPVPVFGQMLPQVPAGLARGQQSVCEFIATPVS
VDLAYFRRACNPRGRAAGEVHGEEGLMFDHSHADPAHPHRATANPWASQR
HSYADRLYNGQYNMSGPAYSPCFKFFTPARGLARLIADTGAAASPTSNGE
YQFKRPVGAGELVEDPCALFQEAYPPLCASDSALLRTPLGAEEHFAQYLI
RDESPLKG
Ligand information
>7fj3 Chain C (length=23) Species: 10345 (Suid alphaherpesvirus 1) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
MSVQIGNGLLMVVAPGTLTVGSA
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7fj3 Structures of pseudorabies virus capsids.
Resolution4.53 Å
Binding residue
(original residue number in PDB)
I132 S133 R147
Binding residue
(residue number reindexed from 1)
I132 S133 R147
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid
GO:0039622 T=16 icosahedral viral capsid

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7fj3, PDBe:7fj3, PDBj:7fj3
PDBsum7fj3
PubMed35318331
UniProtG3G8T2

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