Structure of PDB 7f7c Chain A Binding Site BS01

Receptor Information
>7f7c Chain A (length=254) Species: 2056888 (Sphingobium sp. 20006FA) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ETPPAGMQYLYGSGEASALSLQAYQALLAHVAAKVKVRPADSVILAEGAG
LDDPRFVPCGAKPLAAVFDVDETVMLNIGYEYHAARTGRGFDTAAWDAWE
RTGEAAVAPVPGADRMVRALRQMGVTVVFNTNRAAGNAEPTVRAIKAAGL
GDAVHGQTLFLSGDDAMGSRKDGRRATIAARYCVIAMGGDQLGDFSDLFN
GGPSVTARRAATMQPAIAQMWGNGWFVLPNPVYGSGLKGGFDEVFPLDKR
WAAP
Ligand information
Ligand IDADN
InChIInChI=1S/C10H13N5O4/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(18)6(17)4(1-16)19-10/h2-4,6-7,10,16-18H,1H2,(H2,11,12,13)/t4-,6-,7-,10-/m1/s1
InChIKeyOIRDTQYFTABQOQ-KQYNXXCUSA-N
SMILES
SoftwareSMILES
CACTVS 3.341Nc1ncnc2n(cnc12)[CH]3O[CH](CO)[CH](O)[CH]3O
ACDLabs 10.04n2c1c(ncnc1n(c2)C3OC(C(O)C3O)CO)N
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)N
CACTVS 3.341Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CO)O)O)N
FormulaC10 H13 N5 O4
NameADENOSINE
ChEMBLCHEMBL477
DrugBankDB00640
ZINCZINC000002169830
PDB chain7f7c Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7f7c Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
Resolution2.2 Å
Binding residue
(original residue number in PDB)
Y98 E99 G108 F109 W114 Y251
Binding residue
(residue number reindexed from 1)
Y80 E81 G90 F91 W96 Y233
Annotation score4
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Sun Dec 1 14:37:55 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7f7c', asym_id = 'A', bs = 'BS01', title = 'Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7f7c', asym_id='A', bs='BS01', title='Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0009279', uniprot = '', pdbid = '7f7c', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0009279', uniprot='', pdbid='7f7c', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>