Structure of PDB 7es1 Chain A Binding Site BS01
Receptor Information
>7es1 Chain A (length=408) Species:
39947
(Oryza sativa Japonica Group) [
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MHVVICPWLAFGHLLPCLDLAQRLASRGHRVSFVSTPRNISRLPPVRPAL
APLVAFVALPLPRVEGLPDGAESTNDVPHDRPDMVELHRRAFDGLAAPFS
EFLGTACADWVIVDVFHHWAAAAALEHKVPCAMMLLGSAHMIASIADMSL
AERFSLTLSRSSLVVGRSCVEFEPETVPLLSTLRGKPITFLGLMPPLHEG
RREDGEDATVRWLDAQPAKSVVYVALGSEVPLGVEKVHELALGLELAGTR
FLWALRKPTGVSDADLLPAGFEERTRGRGVVATRWVPQMSILAHAAVGAF
LTHCGWNSTIEGLMFGHPLIMLPIFGDQGPNARLIEAKNAGLQVARNDGD
GSFDREGVAAAIRAVAVEEESSKVFQAKAKKLQEIVADMACHERYIDGFI
QQLRSYKD
Ligand information
Ligand ID
UDP
InChI
InChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKey
XCCTYIAWTASOJW-XVFCMESISA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.0
C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)OP(=O)(O)O)O)O
CACTVS 3.370
O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
CACTVS 3.370
O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
OpenEye OEToolkits 1.7.0
C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)O)O)O
ACDLabs 12.01
O=P(O)(O)OP(=O)(O)OCC2OC(N1C(=O)NC(=O)C=C1)C(O)C2O
Formula
C9 H14 N2 O12 P2
Name
URIDINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL130266
DrugBank
DB03435
ZINC
ZINC000004490939
PDB chain
7es1 Chain A Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
7es1
Catalytic flexibility of rice glycosyltransferase OsUGT91C1 for the production of palatable steviol glycosides.
Resolution
1.66 Å
Binding residue
(original residue number in PDB)
G26 R255 S282 W339 V340 Q342 H357 G359 N361 S362 E365
Binding residue
(residue number reindexed from 1)
G12 R201 S228 W285 V286 Q288 H303 G305 N307 S308 E311
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.4.1.-
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0008194
UDP-glycosyltransferase activity
GO:0016757
glycosyltransferase activity
GO:0035251
UDP-glucosyltransferase activity
View graph for
Molecular Function
External links
PDB
RCSB:7es1
,
PDBe:7es1
,
PDBj:7es1
PDBsum
7es1
PubMed
34857750
UniProt
Q0DPB7
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