Structure of PDB 7edb Chain A Binding Site BS01

Receptor Information

>7edb Chain A (length=350) Species: 10679 (Peduovirus P2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MKVLVNHEQAYNVIINAINDAKKLTDYKTNNQWVSIQNVILGTHLTYRYI
LITGLLAKATDPRVNPLALQANAPVDGAYDARSLCHSVIVGKVEGPFLEG
KLGASNEPFLNKPARYMLHSSDNPVRRGNDKVLQQLSIDILHAATTQTLA
YEMLVIALYFTLQRTNRVITPNSINFDFHKIIYNIISHPCDGETCAIAAA
ISLHLLGEQRGWIIKAHPVNQAGSSSKEILDIDVYHDDIVFLSIEVKDKP
FNYQDVNHAVSKASASGISKVIFLKGPRATNLDIDESLAIENAATKGVSL
SFSDVMTFTTTCYALSPLLSNDRIIDFINNTLKDIRAKDSTIEYIQSIFK

Ligand information

>7edb Chain E (length=13) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

ggcagagctcacg

Receptor-Ligand Complex Structure

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Structure summary

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PDB	7edb Structural analysis of EcoT38I restriction endonuclease
Resolution	2.39 Å
Binding residue (original residue number in PDB)	H44 L45 T46 S105 N106 E107 L110 N111 K112 P113 V125 R126 N220 S225 S226 R336
Binding residue (residue number reindexed from 1)	H44 L45 T46 S105 N106 E107 L110 N111 K112 P113 V125 R126 N220 S225 S226 R336

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0004519	endonuclease activity
GO:0046872	metal ion binding

View graph for
Molecular Function

External links

PDB	RCSB:7edb, PDBe:7edb, PDBj:7edb
PDBsum	7edb
PubMed
UniProt	Q83VS8

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