Structure of PDB 7dly Chain A Binding Site BS01

Receptor Information
>7dly Chain A (length=400) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NVELSRVAVSDTHGEDSPYFAGWKAYDENPYDESHNPSGVIQMGLAENQV
SFDLLETYLETFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTF
ILADPNDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNHFQITPEALE
SAYQTARDANIRVRGVLITNPSNPLGATVQKKVLEDLLDFCVRKNIHLVS
DEIYSGSVFHASEFTSVAEIVENIDDVSVKERVHIVYSLSKDLGLPGFRV
GTIYSYNDNVVRTARRMSSFTLVSSQTQHMLASMLSDEEFTEKYIRINRE
RLRRRYDTIVEGLKKAGIECLKGNAGLFCWMNLGFLLEKKTKDGELQLWD
VILKELNLNISPGSSCHCSEVGWFRVCFANMSENTLEIALKRIHEFMDRR
Ligand information
Ligand IDPPG
InChIInChI=1S/C14H20N3O8P/c1-9-13(18)11(10(6-16-9)8-25-26(21,22)23)7-17-12(14(19)20)2-4-24-5-3-15/h2,4,6,18H,3,5,7-8,15H2,1H3,(H,19,20)(H2,21,22,23)/b4-2+,17-12+
InChIKeyOBCQKAZQAHYUOZ-CALQLVRRSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6Cc1c(c(c(cn1)COP(=O)(O)O)CN=C(C=COCCN)C(=O)O)O
ACDLabs 12.01O=P(O)(O)OCc1cnc(c(O)c1C/N=C(\C=C\OCCN)C(=O)O)C
CACTVS 3.370Cc1ncc(CO[P](O)(O)=O)c(CN=C(\C=C\OCCN)C(O)=O)c1O
CACTVS 3.370Cc1ncc(CO[P](O)(O)=O)c(CN=C(C=COCCN)C(O)=O)c1O
OpenEye OEToolkits 1.7.6Cc1c(c(c(cn1)COP(=O)(O)O)C/N=C(\C=C\OCCN)/C(=O)O)O
FormulaC14 H20 N3 O8 P
Name(2E,3E)-4-(2-aminoethoxy)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]but-3-enoic acid
ChEMBL
DrugBankDB03287
ZINCZINC000098209316
PDB chain7dly Chain A Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7dly Dual activities of ACC synthase: Novel clues regarding the molecular evolution of ACS genes.
Resolution2.94 Å
Binding residue
(original residue number in PDB)		Y33 A60 G134 A135 T136 Y160 N217 D245 I247 Y248 S282 S284 K285 R293 R419
Binding residue
(residue number reindexed from 1)		Y19 A46 G90 A91 T92 Y116 N173 D201 I203 Y204 S238 S240 K241 R249 R375
Annotation score1
Enzymatic activity
Enzyme Commision number 4.4.1.14: 1-aminocyclopropane-1-carboxylate synthase.
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0005515 protein binding
GO:0016829 lyase activity
GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity
GO:0030170 pyridoxal phosphate binding
GO:0042802 identical protein binding
Biological Process
GO:0009058 biosynthetic process
GO:0009693 ethylene biosynthetic process
GO:0009835 fruit ripening
GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7dly, PDBe:7dly, PDBj:7dly
PDBsum7dly
PubMed34757795
UniProtQ9STR4|1A17_ARATH 1-aminocyclopropane-1-carboxylate synthase 7 (Gene Name=ACS7)

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