Structure of PDB 7dck Chain A Binding Site BS01

Receptor Information
>7dck Chain A (length=246) Species: 2496635 (Epsilonproteobacteria bacterium (ex Lamellibrachia satsuma)) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SHHHHHHMASNTVKITISFDNYAYLEGFQTLWGFSCFVETDETTFLFDTG
SNGRVLLQNMQQLDIDLKKAEALILSHPHWDHIGGVDSVLEVHPQMHLFV
PNSLSKHLIRDLNAQTLGVTVINESPQQLLPSVYSTGVMGDIGEQSIVID
TEKGLVVITGCAHPGIEHIAARSIEMLQKPIYLLMGGFHLMYENTARISE
VIETLDELGIQNVCPTHCSGDLAISMFKSHFGDRCLQGGIGRVITI
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain7dck Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7dck Structural and functional identification of the uncharacterized metallo-beta-lactamase superfamily protein TW9814 as a phosphodiesterase with unique metal coordination.
Resolution2.34 Å
Binding residue
(original residue number in PDB)
H79 H81 C163 H165
Binding residue
(residue number reindexed from 1)
H77 H79 C161 H163
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:7dck, PDBe:7dck, PDBj:7dck
PDBsum7dck
PubMed35362475
UniProtA0A426W059

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