Structure of PDB 7d6a Chain A Binding Site BS01

Receptor Information

>7d6a Chain A (length=475) Species: 39947 (Oryza sativa Japonica Group) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

AIHRSDFPASFLFGTATSSYQIEGAYLEGNKSLSNWDVFTHLPGNIKDGS
NGDIADDHYHRYEEDVELMNSLGVNAYRFSISWSRILPKGRFGGVNPAGI
DFYNKLIDSILLKGIQPFVTLTHYDIPQELEDRYGAWLNAEIQSDFGHFA
DVCFGAFGDRVKYWTTFNEPNVAVRHGYMLGTYPPSRCSPPFGHCARGGD
SHAEPYVAAHNVILSHATAIEIYKRKYQSKQRGMIGMVLYSTWYEPLRDV
PEDRLATERALAFETPWFLDPLVYGDYPPEMRQILGGRLPSFSPEDRRKL
RYKLDFIGVNHYTTLYARDCMFSDCPQGQETQHALAAVTGESNGLPIGTP
TAMPTFYVVPDGIEKMVKYFMRRYNNLPMFITENGYAQGGDSYTDAEDWI
DDEDRIEYLEGYLTKLAKVIRDGADVRGYFAWSVVDNFEWLFGYTLRFGL
YYIDYRTQERSPKLSALWYKEFLQN

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

7d6a Chain B Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	7d6a Structural analysis of rice Os4BGlu18 monolignol beta-glucosidase.
Resolution	1.7 Å
Binding residue (original residue number in PDB)	E53 H85
Binding residue (residue number reindexed from 1)	E28 H60
Annotation score	4

Enzymatic activity

Enzyme Commision number

3.2.1.21: beta-glucosidase.

Gene Ontology

	Molecular Function
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

	Biological Process
GO:0005975	carbohydrate metabolic process

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:7d6a, PDBe:7d6a, PDBj:7d6a
PDBsum	7d6a
PubMed	33471829
UniProt	Q7XSK0\|BGL18_ORYSJ Beta-glucosidase 18 (Gene Name=BGLU18)

[Back to BioLiP]