Structure of PDB 7d30 Chain A Binding Site BS01

Receptor Information
>7d30 Chain A (length=234) Species: 32630 (synthetic construct) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QVQLVESGGGLVQAGGSLRLSCAASGFPVEVWRMEWYRQAPGKEREGVAA
IESYGHGTRYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKD
DGQLAYHYDQGTQVTVSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVWQ
GEMAWYRQAPGKEREWVAAISSMGYKTYYADSVKGRFTISRDNAKNTVYL
QMNSLKPEDTAVYYCAVMVGFWYAGQGTQVTVSA
Ligand information
Ligand IDBU2
InChIInChI=1S/C4H10O2/c1-4(6)2-3-5/h4-6H,2-3H2,1H3/t4-/m0/s1
InChIKeyPUPZLCDOIYMWBV-BYPYZUCNSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04OCCC(O)C
OpenEye OEToolkits 1.5.0C[C@@H](CCO)O
CACTVS 3.341C[CH](O)CCO
CACTVS 3.341C[C@H](O)CCO
OpenEye OEToolkits 1.5.0CC(CCO)O
FormulaC4 H10 O2
Name1,3-BUTANEDIOL
ChEMBLCHEMBL1231501
DrugBankDB02202
ZINCZINC000001867144
PDB chain7d30 Chain A Residue 1310 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7d30 A high-affinity RBD-targeting nanobody improves fusion partner's potency against SARS-CoV-2.
Resolution2.1 Å
Binding residue
(original residue number in PDB)		P1028 V1029 W1030 N1074 N1077
Binding residue
(residue number reindexed from 1)		P147 V148 W149 N193 N196
Annotation score1
External links