Structure of PDB 7cod Chain A Binding Site BS01
Receptor Information
>7cod Chain A (length=328) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PAYACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLLTFCRAASVLKA
LPSPVTTLSQLQGLPHFGEHSSRVVQELLEHGVCEEVERVRRSERYQTMK
LFTQIFGVGVKTADRWYREGLRTLDDLREQPQKLTQQQKAGLQHHQDLST
PVLRSDVDALQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHP
KEGQEAGLLPRVMCRLQDQGLILYHQHQDAFERSFCIFRLPQPGSWKAVR
VDLVVAPVSQFPFALLGWTGSALFARELRRFSRKEKGLWLNSHGLFDPEQ
KTFFQAASEEDIFRHLGLEYLPPEQRNA
Ligand information
>7cod Chain T (length=9) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cggcttacg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7cod
Mechanism of genome instability mediated by human DNA polymerase mu misincorporation.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
L177 F385 E386 R387 R442 R445 K450 N457
Binding residue
(residue number reindexed from 1)
L39 F231 E232 R233 R276 R279 K284 N291
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003887
DNA-directed DNA polymerase activity
GO:0005515
protein binding
GO:0016779
nucleotidyltransferase activity
GO:0034061
DNA polymerase activity
GO:0046872
metal ion binding
Biological Process
GO:0006281
DNA repair
GO:0006303
double-strand break repair via nonhomologous end joining
GO:0006310
DNA recombination
GO:0071897
DNA biosynthetic process
Cellular Component
GO:0005634
nucleus
GO:0005654
nucleoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7cod
,
PDBe:7cod
,
PDBj:7cod
PDBsum
7cod
PubMed
34145298
UniProt
Q9NP87
|DPOLM_HUMAN DNA-directed DNA/RNA polymerase mu (Gene Name=POLM)
[
Back to BioLiP
]