Structure of PDB 7c28 Chain A Binding Site BS01

Receptor Information
>7c28 Chain A (length=65) Species: 8619 (Dendroaspis jamesoni kaimosae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LTCVTDKSFGGVITEECAAGQKICFKNWKKMGPKLYDVKRGCTATCPKAD
DNGCVKCCNTDKCNK
Ligand information
Ligand IDSO4
InChIInChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)/p-2
InChIKeyQAOWNCQODCNURD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[O-]S(=O)(=O)[O-]
CACTVS 3.341[O-][S]([O-])(=O)=O
ACDLabs 10.04[O-]S([O-])(=O)=O
FormulaO4 S
NameSULFATE ION
ChEMBL
DrugBankDB14546
ZINC
PDB chain7c28 Chain A Residue 101 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7c28 Unusual quaternary structure of a homodimeric synergistic-type toxin from mamba snake venom defines its molecular evolution.
Resolution2.4 Å
Binding residue
(original residue number in PDB)		K30 K34 Y36
Binding residue
(residue number reindexed from 1)		K30 K34 Y36
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0035821 modulation of process of another organism
Cellular Component
GO:0005576 extracellular region

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7c28, PDBe:7c28, PDBj:7c28
PDBsum7c28
PubMed33000863
UniProtP01407|3SIY_DENJA Synergistic-type venom protein S2C4

[Back to BioLiP]