Structure of PDB 6zy0 Chain A Binding Site BS01

Receptor Information
>6zy0 Chain A (length=701) Species: 391937 (Nitratireductor pacificus pht-3B) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AQISMRLYSNRDRPNHLGPLALERLARVDDVVAQPARQPEDGFAASEDSL
LGDVEEYARLFTRFLDGPVAPLGDAIPDDPARRAENLKASAYFLDASMVG
ICRLDPDDRAGDCDPSHTHALVFAVQFGREPEAGEAGAEWIRGTNAARTD
MRCAEIAAILSGYVRWMGFPARGHFSGDAQVDLARLAVRAGLARVVDGVL
VAPFLRRGFRLGVVTTGYALAADRPLAPEGDLGETAPEVMLGIDGTRPGW
EDAEEEKRPLHMGRYPMETIRRVDEPTTLVVRQEIQRVAKRGDFFKRAEA
GDLGEKAKQEKKRFPMKHPLALGMQPLIQNMVPLQGTREKLAPTGKGGDL
SDPGRNAEAIKALGYYLGADFVGICRAEPWMYYASDEVEGKPIEAYHDYA
VVMLIDQGYETMEGASGDDWISASQSMRAYMRGAEIAGVMAAHCRRMGYS
ARSHSNAHSEVIHNPAILMAGLGEVSRIGDTLLNPFIGPRSQSIVFTTDL
PMSVDRPIDFGLQDFCNQCRKCARECPCNAISFGDKVMFNGYEIWKADVE
KCTKYRVTQMKGSACGRCMKMCPWNREDTVEGRRLAELSIKVPEARAAII
AMDDALQNGKRNLIKRWWFDLEVIDGVAGAPRMGTNERDLSPDRGDKIGA
NQKLAMYPPRLQPPPGTTLDAVLPVDRSGGLAEYAAAETPAAARARLKSS
A
Ligand information
Ligand IDSF4
InChIInChI=1S/4Fe.4S
InChIKeyLJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
FormulaFe4 S4
NameIRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain6zy0 Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6zy0 Catabolic Reductive Dehalogenase Substrate Complex Structures Underpin Rational Repurposing of Substrate Scope.
Resolution2.13 Å
Binding residue
(original residue number in PDB)		R473 L479 F511 C512 C515 C518 C568 P569 W570
Binding residue
(residue number reindexed from 1)		R477 L483 F515 C516 C519 C522 C572 P573 W574
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding

View graph for
Molecular Function
External links
PDB RCSB:6zy0, PDBe:6zy0, PDBj:6zy0
PDBsum6zy0
PubMed32887524
UniProtK2MB66

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