Structure of PDB 6znq Chain A Binding Site BS01

Receptor Information
>6znq Chain A (length=748) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KKKSLTELISDLKGNENVVNWHEIEPREAKTRPMPESIDERIKAALSKRG
IDELYTHQYSAFQYVQKGESIVTVTPTASGKTLCYNLPVLQSIAQDETNR
ALYLFPTKALAQDQKSELNEIIDEMGIDIKSFTYDGDTSPAIRQKVRKAG
HIVITNPDMLHSAILPHHTKWVSLFENLKYIVIDELHTYRGVFGSHVANV
IRRLKRICRFYGSDPVFICTSATIANPKELGEQLTGKPMRLVDDNGAPSG
RKHFVFYNPPIVNKPLNIRRSATAEVNELAKEFLKNKVQTIVFARSRVRV
EIILSHIQELVKKEIGTKSIRGYRGGYLPKERREIERGLREGDILGVVST
NALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANST
PIDQYIVRHPEYFFNRSPESARINPENLIILVDHLKCAAYELPFRADEEF
GAMEVSDILEYLQEEAVLHRNGERYHWASESFPASNISLRSASQENVVIV
DQSDIANVRIIGEMDRFSAMTLLHDEAIYLHEGVQYQVEKLDWDHKKAYV
RKVDVEYYTDANLAVQLKVLEIDKTKEKSRTSLHYGDVTVNALPTIFKKI
KMTTFENIGSGPIHLPEEELHTSAAWLEIKTADEDIGEKTLEQLLLGISN
VLQHIVPVYIMCDRNDVHVVSQIKAAHTGLPTIFLYDHYPGGIGLAEEVF
KRFSDINEAAKQLITHCPCHDGCPSCIGTEIEGIKAKERILQLLDQMS
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6znq A skipping rope translocation mechanism in a widespread family of DNA repair helicases.
Resolution3.34 Å
Binding residue
(original residue number in PDB)		T108 K109 Y135 G137 R144 R148 N157 D159 M160 S163 A164 H168 K171 S297 R298 R325 G326 R333 T351 N352 A353 F483 R491 S494 Q495 N666
Binding residue
(residue number reindexed from 1)		T107 K108 Y134 G136 R143 R147 N156 D158 M159 S162 A163 H167 K170 S296 R297 R324 G325 R332 T350 N351 A352 F482 R490 S493 Q494 N665
Enzymatic activity
Enzyme Commision number 3.6.4.-
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0043138 3'-5' DNA helicase activity
Biological Process
GO:0006289 nucleotide-excision repair
GO:0032508 DNA duplex unwinding
GO:0036297 interstrand cross-link repair

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Molecular Function
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Biological Process
External links
PDB RCSB:6znq, PDBe:6znq, PDBj:6znq
PDBsum6znq
PubMed33300032
UniProtP50830|YPRA_BACSU Uncharacterized ATP-dependent helicase YprA (Gene Name=yprA)

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