Structure of PDB 6z8i Chain A Binding Site BS01

Receptor Information
>6z8i Chain A (length=553) Species: 226186 (Bacteroides thetaiotaomicron VPI-5482) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CDDFLDRQVPQGIVTGDQIASPEYVDNLVISAYAIWATGDDINSSFSLWN
YDVRSDDCYKGGSGTEDGGVFNALEISKGINTTDWNINDIWKRLYQCITR
ANTALQSLDQMDEKTYPLKNQRIAEMRFLRGHAHFMLKQLFKKIVIVNDE
NMEPDAYNELSNTTYTNDEQWQKIADDFQFAYDNLPEVQIEKGRPAQAAA
AAYLAKTYLYKAYRQDGADNALTGINEEDLKQVVKYTDPLIMAKGGYGLE
TDYSMNFLPQYENGAESVWAIQYSINDGTYNGNLNWGMGLTTPQILGCCD
FHKPSQNLVNAFKTDSQGKPLFSTYDNENYEVATDNVDPRLFHTVGMPGF
PYKYNEGYIIQKNDDWSRSKGLYGYYVSLKENVDPDCDCLKKGSYWASSL
NHIVIRYADVLLMRAEALIQLNDGRITDAISLINEVRSRAAGSTMLIFNY
KEDYGVNFKVTPYDLKAYAQDEAMKMLKWERRVEFGMESSRFFDLVRWGE
AKDVINAYYVTEASRCSIYKNAGFTENKNEYLPVPFEQISASNGNYTQNF
GWA
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6z8i Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6z8i Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Resolution2.62 Å
Binding residue
(original residue number in PDB)		E262 Y273 S399 N401
Binding residue
(residue number reindexed from 1)		E262 Y273 S399 N401
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6z8i, PDBe:6z8i, PDBj:6z8i
PDBsum6z8i
PubMed33398001
UniProtQ8A6W4

[Back to BioLiP]