Structure of PDB 6z4w Chain A Binding Site BS01
Receptor Information
>6z4w Chain A (length=230) Species:
1313
(Streptococcus pneumoniae) [
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MSIIEMRDVVKKYDNGTTALRGVSVSVQPGEFAYIVGPSGAGKSTFIRSL
YREVKIDKGSLSVAGFNLVKIKKKDVPLLRRSVGVVFQDYKLLPKKTVYE
NIAYAMEVIGENRRNIKRRVMEVLDLVGLKHKVRSFPNELSGGEQQRIAI
ARAIVNNPKVLIADEPTGNLDPDNSWEIMNLLERINLQGTTILMATHNSQ
IVNTLRHRVIAIENGRVVRDESKGEYGYDD
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
6z4w Chain A Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
6z4w
Structural Characterization of the Essential Cell Division Protein FtsE and Its Interaction with FtsX in Streptococcus pneumoniae.
Resolution
1.36 Å
Binding residue
(original residue number in PDB)
Y13 T17 A19 G40 G42 K43 S44 T45
Binding residue
(residue number reindexed from 1)
Y13 T17 A19 G40 G42 K43 S44 T45
Annotation score
5
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
GO:0022857
transmembrane transporter activity
Biological Process
GO:0051301
cell division
GO:0055085
transmembrane transport
Cellular Component
GO:0005886
plasma membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6z4w
,
PDBe:6z4w
,
PDBj:6z4w
PDBsum
6z4w
PubMed
32873757
UniProt
Q8DQH4
|FTSE_STRR6 Cell division ATP-binding protein FtsE (Gene Name=ftsE)
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