Structure of PDB 6z32 Chain A Binding Site BS01

Receptor Information
>6z32 Chain A (length=686) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CSIRDPNSGFVFNLNPLNSSQGYNVSGIGKIFMFNVCGTMPVCGTILGKP
ASGCEAETQNWKPARPVGIEKSLQLSTEGFITLTYKGPLSAKGTADAFIV
RFVCNDDVYSGPLKFLHQDIDSGQGIRNTYFEFETALACVPSPVDCQVTD
LAGNEYDLTGLSTVRKPWTAVDTSVDGRKRTFYLSVCNPLPYIPGCQGSA
VGSCLVSEGNSWNLGVVQMSPQASLSIMYVNGDKCGNQRFSTRITFECAQ
ISGSPAFQLQDGCEYVFIWRTVEACPVVRVEGDNCEVKDPRHGNLYDLKP
LGLNDTIVSAGEYTYYFRVCGKLSSDVCPTSDKSKVVSSCQEKREPQGFH
KVAGLLTQKLTYENGLLKMNFTGGDTCHKVYQRSTAIFFYCDRGTQRPVF
LKETSDCSYLFEWRTQYACPPFDLTECSFKDGAGNSFDLSSLSRYSDNWE
AITGTGDPEHYLINVCKSLAPQAGTEPCPPEAAACLLGSKPVNLGRVRDG
PQWRDGIIVLKYVDGDLCPDGIRKKSTTIRFTCSESQVNSRPMFISAVED
CEYTFAWPTATACPMDCQVTNPSTGHLFDLSSLSGRAGFTAAYGLVYMSI
CGENENCPPGVGACFGISVGKANKRLRYVDQVLQLVYKDGSPCPSYKSVI
SFVCRPEAGPTNRPMLISLDKQTCTLFFSWHTPLAC
Ligand information
Ligand IDMAN
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6+/m1/s1
InChIKeyWQZGKKKJIJFFOK-PQMKYFCFSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341OC[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namealpha-D-mannopyranose;
alpha-D-mannose;
D-mannose;
mannose
ChEMBLCHEMBL365590
DrugBank
ZINCZINC000003860903
PDB chain6z32 Chain D Residue 6 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6z32 Structure of the Human Cation-Independent Mannose 6-Phosphate/IGF2 Receptor Domains 7-11 Uncovers the Mannose 6-Phosphate Binding Site of Domain 9.
Resolution3.47 Å
Binding residue
(original residue number in PDB)		Y1255 Q1283 E1345
Binding residue
(residue number reindexed from 1)		Y313 Q341 E403
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0038023 signaling receptor activity
Biological Process
GO:0007041 lysosomal transport

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6z32, PDBe:6z32, PDBj:6z32
PDBsum6z32
PubMed32877646
UniProtP11717|MPRI_HUMAN Cation-independent mannose-6-phosphate receptor (Gene Name=IGF2R)

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