Structure of PDB 6x9p Chain A Binding Site BS01

Receptor Information
>6x9p Chain A (length=182) Species: 178399 (Marinomonas primoryensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PDSLFAGLVGEYYGTNSQLNNISDFRALVDSKEADATFEAANISYGRGSS
DVAKGTHLQEFLGSDASTLSTDPGDNTDGGIYLQGYVYLEAGTYNFKVTA
DDGYEITINGNPVATVDNNQSVYTVTHASFTISESGYQAIDMIWWDQGGD
YVFQPTLSADGGSTYFVLDSAILSSTGETPYT
Ligand information
Ligand IDUZJ
InChIInChI=1S/C5H10O4/c6-3-1-5(8)9-2-4(3)7/h3-8H,1-2H2/t3-,4+,5+/m0/s1
InChIKeyZVQAVWAHRUNNPG-VPENINKCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7C1[C@@H]([C@@H](CO[C@H]1O)O)O
CACTVS 3.385O[CH]1C[CH](O)[CH](O)CO1
OpenEye OEToolkits 2.0.7C1C(C(COC1O)O)O
CACTVS 3.385O[C@H]1C[C@H](O)[C@H](O)CO1
ACDLabs 12.01C1(O)C(CC(O)OC1)O
FormulaC5 H10 O4
Name2-deoxy-beta-D-ribopyranose;
2-deoxy-beta-D-erythro-pentopyranose
ChEMBL
DrugBank
ZINCZINC000004521357
PDB chain6x9p Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6x9p Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Resolution1.0 Å
Binding residue
(original residue number in PDB)		D110 D111 Q129 Q156 G157 D159
Binding residue
(residue number reindexed from 1)		D101 D102 Q120 Q147 G148 D150
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links