Structure of PDB 6x6x Chain A Binding Site BS01

Receptor Information

>6x6x Chain A (length=417) Species: 1496 (Clostridioides difficile) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TTYKAPIERPEDFLKDKEKAKEWERKEAERIEQKLERSEKEALESYKKDS
VEISKYSQTRNYFYDYQIEANSREKEYKELRNAISKNKIDKPMYVYYFES
PEKFAFNKVIRTENQNEISLEKFNEFKETIQNKLFKQDGFKDISLYEPGK
GDEKPTPLLMHLKLPRNTGMLPYTNTNNVSTLIEQGYSIKIDKIVRIVID
GKHYIKAEASVVSSLDFKDDVSKGDSWGKANYNDWSNKLTPNELADVNDY
MRGGYTAINNYLISNGPVNNPNPELDSKITNIENALKREPIPTNLTVYRR
SGPQEFGLTLTSPEYDFNKLENIDAFKSKWEGQALSYPNFISTSIGSVNM
SAFAKRKIVLRITIPKGSPGAYLSAIPGYAGEYEVLLNHGSKFKINKIDS
YKDGTITKLIVDATLIP

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

6x6x Chain A Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6x6x Crystal structure of enzymatic binary toxin component from Clostridium difficile in complex with
Resolution	1.71 Å
Binding residue (original residue number in PDB)	E120 H206
Binding residue (residue number reindexed from 1)	E117 H203
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0000166	nucleotide binding
GO:0016740	transferase activity
GO:0046872	metal ion binding

	Cellular Component
GO:0005576	extracellular region

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Molecular Function

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Cellular Component

External links

PDB	RCSB:6x6x, PDBe:6x6x, PDBj:6x6x
PDBsum	6x6x
PubMed
UniProt	Q9KH42

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