Structure of PDB 6wkp Chain A Binding Site BS01
Receptor Information
>6wkp Chain A (length=103) Species:
2697049
(Severe acute respiratory syndrome coronavirus 2) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRAPRWYFYYLG
TGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRAIVLQLPQGTTLPKG
FYA
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
6wkp Chain A Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6wkp
Crystal structure of RNA-binding domain of nucleocapsid phosphoprotein from SARS CoV-2, monoclinic crystal form
Resolution
2.67 Å
Binding residue
(original residue number in PDB)
D82 H145
Binding residue
(residue number reindexed from 1)
D33 H81
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
Cellular Component
GO:0019013
viral nucleocapsid
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:6wkp
,
PDBe:6wkp
,
PDBj:6wkp
PDBsum
6wkp
PubMed
38327783
UniProt
P0DTC9
|NCAP_SARS2 Nucleoprotein (Gene Name=N)
[
Back to BioLiP
]